Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim35Q8C006 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim35Q8C006 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim35Q8C006 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim35Q8C006 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim35Q8C006 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim35Q8C006 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim35Q8C006 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim35Q8C006 Gm28196-201ENSMUST00000187719 640 ntBASIC20.94■□□□□ 0.94
Trim35Q8C006 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim35Q8C006 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trim35Q8C006 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim35Q8C006 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim35Q8C006 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim35Q8C006 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Trim35Q8C006 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim35Q8C006 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.93■□□□□ 0.94
Trim35Q8C006 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim35Q8C006 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim35Q8C006 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim35Q8C006 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim35Q8C006 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim35Q8C006 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.92■□□□□ 0.94
Trim35Q8C006 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim35Q8C006 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim35Q8C006 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim35Q8C006 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim35Q8C006 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim35Q8C006 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim35Q8C006 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim35Q8C006 Gm22567-201ENSMUST00000175542 342 ntBASIC20.91■□□□□ 0.94
Trim35Q8C006 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim35Q8C006 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim35Q8C006 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.9■□□□□ 0.94
Trim35Q8C006 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.9■□□□□ 0.94
Trim35Q8C006 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim35Q8C006 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim35Q8C006 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim35Q8C006 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim35Q8C006 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.9■□□□□ 0.94
Trim35Q8C006 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim35Q8C006 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim35Q8C006 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim35Q8C006 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim35Q8C006 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim35Q8C006 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim35Q8C006 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim35Q8C006 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim35Q8C006 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim35Q8C006 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim35Q8C006 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim35Q8C006 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim35Q8C006 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trim35Q8C006 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trim35Q8C006 Gm15820-201ENSMUST00000201566 728 ntBASIC20.88■□□□□ 0.93
Trim35Q8C006 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim35Q8C006 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim35Q8C006 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim35Q8C006 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim35Q8C006 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim35Q8C006 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim35Q8C006 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim35Q8C006 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim35Q8C006 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.87■□□□□ 0.93
Trim35Q8C006 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim35Q8C006 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.87■□□□□ 0.93
Trim35Q8C006 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim35Q8C006 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Trim35Q8C006 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim35Q8C006 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim35Q8C006 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trim35Q8C006 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim35Q8C006 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trim35Q8C006 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.86■□□□□ 0.93
Trim35Q8C006 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.86■□□□□ 0.93
Trim35Q8C006 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trim35Q8C006 Gm44882-201ENSMUST00000205702 802 ntBASIC20.86■□□□□ 0.93
Trim35Q8C006 Gm10232-201ENSMUST00000089221 720 ntBASIC20.86■□□□□ 0.93
Trim35Q8C006 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim35Q8C006 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim35Q8C006 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim35Q8C006 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim35Q8C006 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim35Q8C006 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.85■□□□□ 0.93
Trim35Q8C006 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim35Q8C006 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim35Q8C006 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim35Q8C006 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim35Q8C006 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim35Q8C006 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim35Q8C006 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim35Q8C006 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim35Q8C006 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Trim35Q8C006 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim35Q8C006 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim35Q8C006 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim35Q8C006 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim35Q8C006 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Trim35Q8C006 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim35Q8C006 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms