Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aph1aQ8BVF7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Aph1aQ8BVF7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aph1aQ8BVF7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Aph1aQ8BVF7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aph1aQ8BVF7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Aph1aQ8BVF7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Aph1aQ8BVF7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aph1aQ8BVF7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Aph1aQ8BVF7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aph1aQ8BVF7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Aph1aQ8BVF7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.34■□□□□ 0.53
Aph1aQ8BVF7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aph1aQ8BVF7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Aph1aQ8BVF7 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.33■□□□□ 0.53
Aph1aQ8BVF7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Aph1aQ8BVF7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Aph1aQ8BVF7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Aph1aQ8BVF7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Aph1aQ8BVF7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.33■□□□□ 0.52
Aph1aQ8BVF7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Aph1aQ8BVF7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Aph1aQ8BVF7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aph1aQ8BVF7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Aph1aQ8BVF7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Aph1aQ8BVF7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Aph1aQ8BVF7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Aph1aQ8BVF7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Aph1aQ8BVF7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Aph1aQ8BVF7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1aQ8BVF7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1aQ8BVF7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1aQ8BVF7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1aQ8BVF7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1aQ8BVF7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1aQ8BVF7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.31■□□□□ 0.52
Aph1aQ8BVF7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1aQ8BVF7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Aph1aQ8BVF7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.31■□□□□ 0.52
Aph1aQ8BVF7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1aQ8BVF7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1aQ8BVF7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Aph1aQ8BVF7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1aQ8BVF7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1aQ8BVF7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1aQ8BVF7 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.3■□□□□ 0.52
Aph1aQ8BVF7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1aQ8BVF7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.3■□□□□ 0.52
Aph1aQ8BVF7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.29■□□□□ 0.52
Aph1aQ8BVF7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1aQ8BVF7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Aph1aQ8BVF7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1aQ8BVF7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Aph1aQ8BVF7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.28■□□□□ 0.52
Aph1aQ8BVF7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1aQ8BVF7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Aph1aQ8BVF7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1aQ8BVF7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1aQ8BVF7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1aQ8BVF7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.27■□□□□ 0.52
Aph1aQ8BVF7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Aph1aQ8BVF7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.27■□□□□ 0.52
Aph1aQ8BVF7 Gm22238-201ENSMUST00000175222 88 ntBASIC18.27■□□□□ 0.52
Aph1aQ8BVF7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aph1aQ8BVF7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.27■□□□□ 0.52
Aph1aQ8BVF7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aph1aQ8BVF7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Aph1aQ8BVF7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Aph1aQ8BVF7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1aQ8BVF7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1aQ8BVF7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1aQ8BVF7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1aQ8BVF7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.25■□□□□ 0.51
Aph1aQ8BVF7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.25■□□□□ 0.51
Aph1aQ8BVF7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1aQ8BVF7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1aQ8BVF7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1aQ8BVF7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aph1aQ8BVF7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 191.2 ms