Protein–RNA interactions for Protein: Q80Y32

Hmgxb4, HMG box domain-containing 4, mousemouse

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgxb4Q80Y32 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hmgxb4Q80Y32 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgxb4Q80Y32 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgxb4Q80Y32 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgxb4Q80Y32 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgxb4Q80Y32 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Hmgxb4Q80Y32 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgxb4Q80Y32 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgxb4Q80Y32 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgxb4Q80Y32 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgxb4Q80Y32 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgxb4Q80Y32 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgxb4Q80Y32 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgxb4Q80Y32 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgxb4Q80Y32 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgxb4Q80Y32 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgxb4Q80Y32 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hmgxb4Q80Y32 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Hmgxb4Q80Y32 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgxb4Q80Y32 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgxb4Q80Y32 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgxb4Q80Y32 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hmgxb4Q80Y32 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.27■■□□□ 1
Hmgxb4Q80Y32 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hmgxb4Q80Y32 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.27■■□□□ 1
Hmgxb4Q80Y32 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hmgxb4Q80Y32 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hmgxb4Q80Y32 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hmgxb4Q80Y32 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hmgxb4Q80Y32 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Hmgxb4Q80Y32 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgxb4Q80Y32 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.26■□□□□ 0.99
Hmgxb4Q80Y32 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgxb4Q80Y32 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgxb4Q80Y32 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgxb4Q80Y32 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hmgxb4Q80Y32 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgxb4Q80Y32 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.25■□□□□ 0.99
Hmgxb4Q80Y32 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgxb4Q80Y32 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgxb4Q80Y32 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.25■□□□□ 0.99
Hmgxb4Q80Y32 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgxb4Q80Y32 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgxb4Q80Y32 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgxb4Q80Y32 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgxb4Q80Y32 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgxb4Q80Y32 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgxb4Q80Y32 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgxb4Q80Y32 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgxb4Q80Y32 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgxb4Q80Y32 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Hmgxb4Q80Y32 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Hmgxb4Q80Y32 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Hmgxb4Q80Y32 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Hmgxb4Q80Y32 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgxb4Q80Y32 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.22■□□□□ 0.99
Hmgxb4Q80Y32 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgxb4Q80Y32 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgxb4Q80Y32 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgxb4Q80Y32 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.21■□□□□ 0.99
Hmgxb4Q80Y32 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgxb4Q80Y32 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgxb4Q80Y32 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgxb4Q80Y32 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Hmgxb4Q80Y32 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.21■□□□□ 0.99
Hmgxb4Q80Y32 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.2■□□□□ 0.99
Hmgxb4Q80Y32 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgxb4Q80Y32 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Hmgxb4Q80Y32 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.2■□□□□ 0.98
Hmgxb4Q80Y32 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgxb4Q80Y32 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgxb4Q80Y32 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgxb4Q80Y32 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.2■□□□□ 0.98
Hmgxb4Q80Y32 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.2■□□□□ 0.98
Hmgxb4Q80Y32 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgxb4Q80Y32 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgxb4Q80Y32 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgxb4Q80Y32 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgxb4Q80Y32 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgxb4Q80Y32 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgxb4Q80Y32 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Hmgxb4Q80Y32 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Hmgxb4Q80Y32 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Hmgxb4Q80Y32 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.19■□□□□ 0.98
Hmgxb4Q80Y32 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgxb4Q80Y32 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hmgxb4Q80Y32 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Hmgxb4Q80Y32 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgxb4Q80Y32 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms