Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38bQ80SY5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.65■■□□□ 1.06
Prpf38bQ80SY5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38bQ80SY5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf38bQ80SY5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf38bQ80SY5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.64■■□□□ 1.05
Prpf38bQ80SY5 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.63■■□□□ 1.05
Prpf38bQ80SY5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Prpf38bQ80SY5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38bQ80SY5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.63■■□□□ 1.05
Prpf38bQ80SY5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38bQ80SY5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38bQ80SY5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Prpf38bQ80SY5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38bQ80SY5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38bQ80SY5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf38bQ80SY5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38bQ80SY5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Prpf38bQ80SY5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Prpf38bQ80SY5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38bQ80SY5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38bQ80SY5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38bQ80SY5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38bQ80SY5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf38bQ80SY5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Prpf38bQ80SY5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38bQ80SY5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38bQ80SY5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38bQ80SY5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Prpf38bQ80SY5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf38bQ80SY5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf38bQ80SY5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf38bQ80SY5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.6■■□□□ 1.05
Prpf38bQ80SY5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf38bQ80SY5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38bQ80SY5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Prpf38bQ80SY5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38bQ80SY5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.59■■□□□ 1.05
Prpf38bQ80SY5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38bQ80SY5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38bQ80SY5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38bQ80SY5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf38bQ80SY5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf38bQ80SY5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.58■■□□□ 1.05
Prpf38bQ80SY5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Prpf38bQ80SY5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.58■■□□□ 1.05
Prpf38bQ80SY5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Prpf38bQ80SY5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.58■■□□□ 1.05
Prpf38bQ80SY5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf38bQ80SY5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Prpf38bQ80SY5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38bQ80SY5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38bQ80SY5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38bQ80SY5 Gm6139-201ENSMUST00000079261 882 ntBASIC21.57■■□□□ 1.04
Prpf38bQ80SY5 Gm5874-201ENSMUST00000096101 508 ntBASIC21.57■■□□□ 1.04
Prpf38bQ80SY5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38bQ80SY5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38bQ80SY5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.57■■□□□ 1.04
Prpf38bQ80SY5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38bQ80SY5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38bQ80SY5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38bQ80SY5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.56■■□□□ 1.04
Prpf38bQ80SY5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38bQ80SY5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38bQ80SY5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.56■■□□□ 1.04
Prpf38bQ80SY5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38bQ80SY5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Prpf38bQ80SY5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38bQ80SY5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Prpf38bQ80SY5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.55■■□□□ 1.04
Prpf38bQ80SY5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
Prpf38bQ80SY5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38bQ80SY5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Prpf38bQ80SY5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38bQ80SY5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Prpf38bQ80SY5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38bQ80SY5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38bQ80SY5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38bQ80SY5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38bQ80SY5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38bQ80SY5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38bQ80SY5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38bQ80SY5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38bQ80SY5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.54■■□□□ 1.04
Prpf38bQ80SY5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf38bQ80SY5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.53■■□□□ 1.04
Prpf38bQ80SY5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Prpf38bQ80SY5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf38bQ80SY5 Gm7291-201ENSMUST00000199147 382 ntBASIC21.53■■□□□ 1.04
Prpf38bQ80SY5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf38bQ80SY5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Prpf38bQ80SY5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Prpf38bQ80SY5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38bQ80SY5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38bQ80SY5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38bQ80SY5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38bQ80SY5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Prpf38bQ80SY5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.51■■□□□ 1.03
Prpf38bQ80SY5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.51■■□□□ 1.03
Prpf38bQ80SY5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 167.2 ms