Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Trappc6aQ78XR0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trappc6aQ78XR0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trappc6aQ78XR0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trappc6aQ78XR0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trappc6aQ78XR0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trappc6aQ78XR0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc6aQ78XR0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc6aQ78XR0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc6aQ78XR0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc6aQ78XR0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc6aQ78XR0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc6aQ78XR0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc6aQ78XR0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc6aQ78XR0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc6aQ78XR0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Trappc6aQ78XR0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trappc6aQ78XR0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trappc6aQ78XR0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.64■□□□□ 0.89
Trappc6aQ78XR0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.64■□□□□ 0.89
Trappc6aQ78XR0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trappc6aQ78XR0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trappc6aQ78XR0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Trappc6aQ78XR0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trappc6aQ78XR0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trappc6aQ78XR0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Trappc6aQ78XR0 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.63■□□□□ 0.89
Trappc6aQ78XR0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.63■□□□□ 0.89
Trappc6aQ78XR0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trappc6aQ78XR0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
Trappc6aQ78XR0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trappc6aQ78XR0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trappc6aQ78XR0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.62■□□□□ 0.89
Trappc6aQ78XR0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trappc6aQ78XR0 Gm8493-201ENSMUST00000196881 489 ntBASIC20.62■□□□□ 0.89
Trappc6aQ78XR0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trappc6aQ78XR0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trappc6aQ78XR0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.6■□□□□ 0.89
Trappc6aQ78XR0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trappc6aQ78XR0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trappc6aQ78XR0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Trappc6aQ78XR0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trappc6aQ78XR0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Trappc6aQ78XR0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.6■□□□□ 0.89
Trappc6aQ78XR0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trappc6aQ78XR0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trappc6aQ78XR0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.6■□□□□ 0.89
Trappc6aQ78XR0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trappc6aQ78XR0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trappc6aQ78XR0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trappc6aQ78XR0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Trappc6aQ78XR0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trappc6aQ78XR0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trappc6aQ78XR0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trappc6aQ78XR0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
Trappc6aQ78XR0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trappc6aQ78XR0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trappc6aQ78XR0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trappc6aQ78XR0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trappc6aQ78XR0 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.57■□□□□ 0.88
Trappc6aQ78XR0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.57■□□□□ 0.88
Trappc6aQ78XR0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trappc6aQ78XR0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
Trappc6aQ78XR0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trappc6aQ78XR0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trappc6aQ78XR0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trappc6aQ78XR0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trappc6aQ78XR0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trappc6aQ78XR0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trappc6aQ78XR0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trappc6aQ78XR0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trappc6aQ78XR0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trappc6aQ78XR0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.56■□□□□ 0.88
Trappc6aQ78XR0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.56■□□□□ 0.88
Trappc6aQ78XR0 Gm7143-201ENSMUST00000222811 859 ntBASIC20.56■□□□□ 0.88
Trappc6aQ78XR0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trappc6aQ78XR0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Trappc6aQ78XR0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms