Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.52■□□□□ 0.72
Rnf220Q6PDX6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf220Q6PDX6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf220Q6PDX6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.52■□□□□ 0.72
Rnf220Q6PDX6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf220Q6PDX6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf220Q6PDX6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf220Q6PDX6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf220Q6PDX6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rnf220Q6PDX6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf220Q6PDX6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf220Q6PDX6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf220Q6PDX6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Rnf220Q6PDX6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.5■□□□□ 0.71
Rnf220Q6PDX6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf220Q6PDX6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf220Q6PDX6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf220Q6PDX6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rnf220Q6PDX6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf220Q6PDX6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Rnf220Q6PDX6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf220Q6PDX6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf220Q6PDX6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf220Q6PDX6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf220Q6PDX6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf220Q6PDX6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf220Q6PDX6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf220Q6PDX6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.48■□□□□ 0.71
Rnf220Q6PDX6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rnf220Q6PDX6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf220Q6PDX6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rnf220Q6PDX6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf220Q6PDX6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf220Q6PDX6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf220Q6PDX6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf220Q6PDX6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf220Q6PDX6 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.47■□□□□ 0.71
Rnf220Q6PDX6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf220Q6PDX6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf220Q6PDX6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf220Q6PDX6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rnf220Q6PDX6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf220Q6PDX6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf220Q6PDX6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf220Q6PDX6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf220Q6PDX6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rnf220Q6PDX6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf220Q6PDX6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Rnf220Q6PDX6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf220Q6PDX6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rnf220Q6PDX6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf220Q6PDX6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf220Q6PDX6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf220Q6PDX6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf220Q6PDX6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf220Q6PDX6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf220Q6PDX6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf220Q6PDX6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf220Q6PDX6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Rnf220Q6PDX6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf220Q6PDX6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf220Q6PDX6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rnf220Q6PDX6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf220Q6PDX6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rnf220Q6PDX6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf220Q6PDX6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf220Q6PDX6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf220Q6PDX6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rnf220Q6PDX6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rnf220Q6PDX6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf220Q6PDX6 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms