Protein–RNA interactions for Protein: Q61406

Cfhr1, Complement factor H-related 1, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfhr1Q61406 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfhr1Q61406 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.53■□□□□ 0.56
Cfhr1Q61406 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfhr1Q61406 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfhr1Q61406 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cfhr1Q61406 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cfhr1Q61406 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cfhr1Q61406 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfhr1Q61406 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Cfhr1Q61406 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cfhr1Q61406 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cfhr1Q61406 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.52■□□□□ 0.55
Cfhr1Q61406 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.52■□□□□ 0.55
Cfhr1Q61406 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.52■□□□□ 0.55
Cfhr1Q61406 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Cfhr1Q61406 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cfhr1Q61406 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfhr1Q61406 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfhr1Q61406 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Cfhr1Q61406 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfhr1Q61406 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Cfhr1Q61406 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.5■□□□□ 0.55
Cfhr1Q61406 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cfhr1Q61406 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.5■□□□□ 0.55
Cfhr1Q61406 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfhr1Q61406 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfhr1Q61406 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfhr1Q61406 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.5■□□□□ 0.55
Cfhr1Q61406 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfhr1Q61406 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfhr1Q61406 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cfhr1Q61406 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cfhr1Q61406 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfhr1Q61406 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cfhr1Q61406 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cfhr1Q61406 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfhr1Q61406 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.49■□□□□ 0.55
Cfhr1Q61406 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.49■□□□□ 0.55
Cfhr1Q61406 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfhr1Q61406 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfhr1Q61406 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfhr1Q61406 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfhr1Q61406 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfhr1Q61406 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cfhr1Q61406 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfhr1Q61406 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfhr1Q61406 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfhr1Q61406 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfhr1Q61406 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cfhr1Q61406 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cfhr1Q61406 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfhr1Q61406 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfhr1Q61406 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cfhr1Q61406 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfhr1Q61406 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.48■□□□□ 0.55
Cfhr1Q61406 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Gm43137-201ENSMUST00000198052 594 ntBASIC18.47■□□□□ 0.55
Cfhr1Q61406 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cfhr1Q61406 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cfhr1Q61406 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cfhr1Q61406 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.46■□□□□ 0.55
Cfhr1Q61406 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.46■□□□□ 0.55
Cfhr1Q61406 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cfhr1Q61406 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cfhr1Q61406 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cfhr1Q61406 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfhr1Q61406 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cfhr1Q61406 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfhr1Q61406 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms