Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.67■□□□□ 0.42
Clns1aQ61189 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clns1aQ61189 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.67■□□□□ 0.42
Clns1aQ61189 Iqck-206ENSMUST00000208658 2891 ntBASIC17.67■□□□□ 0.42
Clns1aQ61189 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clns1aQ61189 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clns1aQ61189 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clns1aQ61189 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Clns1aQ61189 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clns1aQ61189 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.67■□□□□ 0.42
Clns1aQ61189 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clns1aQ61189 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clns1aQ61189 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Clns1aQ61189 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clns1aQ61189 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clns1aQ61189 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clns1aQ61189 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clns1aQ61189 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Clns1aQ61189 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clns1aQ61189 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Clns1aQ61189 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.66■□□□□ 0.42
Clns1aQ61189 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clns1aQ61189 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Clns1aQ61189 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clns1aQ61189 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Clns1aQ61189 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Clns1aQ61189 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clns1aQ61189 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clns1aQ61189 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Clns1aQ61189 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clns1aQ61189 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Clns1aQ61189 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.65■□□□□ 0.42
Clns1aQ61189 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Clns1aQ61189 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Clns1aQ61189 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clns1aQ61189 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clns1aQ61189 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clns1aQ61189 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clns1aQ61189 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.64■□□□□ 0.41
Clns1aQ61189 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clns1aQ61189 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Clns1aQ61189 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clns1aQ61189 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clns1aQ61189 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Clns1aQ61189 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clns1aQ61189 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clns1aQ61189 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clns1aQ61189 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Clns1aQ61189 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clns1aQ61189 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clns1aQ61189 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clns1aQ61189 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clns1aQ61189 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clns1aQ61189 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clns1aQ61189 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Clns1aQ61189 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.63■□□□□ 0.41
Clns1aQ61189 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clns1aQ61189 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clns1aQ61189 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Clns1aQ61189 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clns1aQ61189 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clns1aQ61189 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clns1aQ61189 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clns1aQ61189 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Clns1aQ61189 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clns1aQ61189 Gm8503-201ENSMUST00000118131 455 ntBASIC17.62■□□□□ 0.41
Clns1aQ61189 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.62■□□□□ 0.41
Clns1aQ61189 Gm44428-201ENSMUST00000204474 874 ntBASIC17.62■□□□□ 0.41
Clns1aQ61189 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.62■□□□□ 0.41
Clns1aQ61189 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.62■□□□□ 0.41
Clns1aQ61189 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clns1aQ61189 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clns1aQ61189 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clns1aQ61189 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Clns1aQ61189 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Clns1aQ61189 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.62■□□□□ 0.41
Clns1aQ61189 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clns1aQ61189 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clns1aQ61189 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Clns1aQ61189 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Clns1aQ61189 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clns1aQ61189 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clns1aQ61189 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Clns1aQ61189 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clns1aQ61189 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Clns1aQ61189 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clns1aQ61189 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clns1aQ61189 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clns1aQ61189 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clns1aQ61189 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clns1aQ61189 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clns1aQ61189 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clns1aQ61189 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.6■□□□□ 0.41
Clns1aQ61189 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.6■□□□□ 0.41
Clns1aQ61189 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms