Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb1Q61009 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Scarb1Q61009 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarb1Q61009 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.41■□□□□ 0.38
Scarb1Q61009 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scarb1Q61009 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarb1Q61009 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scarb1Q61009 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarb1Q61009 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.41■□□□□ 0.38
Scarb1Q61009 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarb1Q61009 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarb1Q61009 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarb1Q61009 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.4■□□□□ 0.38
Scarb1Q61009 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scarb1Q61009 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.4■□□□□ 0.38
Scarb1Q61009 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarb1Q61009 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarb1Q61009 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.4■□□□□ 0.38
Scarb1Q61009 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarb1Q61009 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scarb1Q61009 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scarb1Q61009 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Scarb1Q61009 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scarb1Q61009 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scarb1Q61009 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.39■□□□□ 0.37
Scarb1Q61009 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scarb1Q61009 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scarb1Q61009 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scarb1Q61009 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.38■□□□□ 0.37
Scarb1Q61009 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scarb1Q61009 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Scarb1Q61009 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scarb1Q61009 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scarb1Q61009 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scarb1Q61009 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scarb1Q61009 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scarb1Q61009 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Scarb1Q61009 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scarb1Q61009 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scarb1Q61009 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scarb1Q61009 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Scarb1Q61009 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scarb1Q61009 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scarb1Q61009 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Scarb1Q61009 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.36■□□□□ 0.37
Scarb1Q61009 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.36■□□□□ 0.37
Scarb1Q61009 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scarb1Q61009 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scarb1Q61009 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scarb1Q61009 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.36■□□□□ 0.37
Scarb1Q61009 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scarb1Q61009 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.36■□□□□ 0.37
Scarb1Q61009 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scarb1Q61009 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scarb1Q61009 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scarb1Q61009 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scarb1Q61009 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scarb1Q61009 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scarb1Q61009 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Scarb1Q61009 Gm6311-201ENSMUST00000073790 878 ntBASIC17.35■□□□□ 0.37
Scarb1Q61009 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scarb1Q61009 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scarb1Q61009 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scarb1Q61009 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scarb1Q61009 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scarb1Q61009 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scarb1Q61009 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb1Q61009 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb1Q61009 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb1Q61009 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scarb1Q61009 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb1Q61009 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb1Q61009 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb1Q61009 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb1Q61009 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb1Q61009 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb1Q61009 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scarb1Q61009 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scarb1Q61009 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scarb1Q61009 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scarb1Q61009 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scarb1Q61009 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarb1Q61009 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.33■□□□□ 0.36
Scarb1Q61009 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarb1Q61009 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scarb1Q61009 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarb1Q61009 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Scarb1Q61009 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb1Q61009 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms