Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Shroom1Q5SX79 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Shroom1Q5SX79 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.15■■□□□ 1.14
Shroom1Q5SX79 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Shroom1Q5SX79 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Shroom1Q5SX79 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Shroom1Q5SX79 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Shroom1Q5SX79 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Shroom1Q5SX79 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Shroom1Q5SX79 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Shroom1Q5SX79 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Shroom1Q5SX79 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.13■■□□□ 1.13
Shroom1Q5SX79 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Shroom1Q5SX79 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.13■■□□□ 1.13
Shroom1Q5SX79 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Shroom1Q5SX79 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Shroom1Q5SX79 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Shroom1Q5SX79 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Shroom1Q5SX79 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Shroom1Q5SX79 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.12■■□□□ 1.13
Shroom1Q5SX79 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Shroom1Q5SX79 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Shroom1Q5SX79 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shroom1Q5SX79 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shroom1Q5SX79 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shroom1Q5SX79 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Shroom1Q5SX79 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shroom1Q5SX79 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shroom1Q5SX79 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Shroom1Q5SX79 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shroom1Q5SX79 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Shroom1Q5SX79 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shroom1Q5SX79 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Shroom1Q5SX79 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.1■■□□□ 1.13
Shroom1Q5SX79 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Shroom1Q5SX79 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
Shroom1Q5SX79 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Shroom1Q5SX79 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Shroom1Q5SX79 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Shroom1Q5SX79 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Shroom1Q5SX79 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Shroom1Q5SX79 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Shroom1Q5SX79 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Shroom1Q5SX79 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.08■■□□□ 1.13
Shroom1Q5SX79 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Shroom1Q5SX79 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Shroom1Q5SX79 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Shroom1Q5SX79 Gm27454-201ENSMUST00000185090 204 ntBASIC22.08■■□□□ 1.13
Shroom1Q5SX79 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Shroom1Q5SX79 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Shroom1Q5SX79 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Shroom1Q5SX79 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Shroom1Q5SX79 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shroom1Q5SX79 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Shroom1Q5SX79 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shroom1Q5SX79 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.07■■□□□ 1.12
Shroom1Q5SX79 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Shroom1Q5SX79 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shroom1Q5SX79 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shroom1Q5SX79 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shroom1Q5SX79 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shroom1Q5SX79 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.06■■□□□ 1.12
Shroom1Q5SX79 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.06■■□□□ 1.12
Shroom1Q5SX79 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.06■■□□□ 1.12
Shroom1Q5SX79 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.06■■□□□ 1.12
Shroom1Q5SX79 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Shroom1Q5SX79 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Shroom1Q5SX79 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Shroom1Q5SX79 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Shroom1Q5SX79 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shroom1Q5SX79 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.05■■□□□ 1.12
Shroom1Q5SX79 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Shroom1Q5SX79 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Shroom1Q5SX79 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Shroom1Q5SX79 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Shroom1Q5SX79 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.04■■□□□ 1.12
Shroom1Q5SX79 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Shroom1Q5SX79 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Shroom1Q5SX79 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
Shroom1Q5SX79 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Shroom1Q5SX79 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Shroom1Q5SX79 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.03■■□□□ 1.12
Shroom1Q5SX79 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Shroom1Q5SX79 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Shroom1Q5SX79 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Shroom1Q5SX79 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shroom1Q5SX79 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.02■■□□□ 1.12
Shroom1Q5SX79 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Shroom1Q5SX79 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Shroom1Q5SX79 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shroom1Q5SX79 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Shroom1Q5SX79 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shroom1Q5SX79 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.01■■□□□ 1.11
Shroom1Q5SX79 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shroom1Q5SX79 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shroom1Q5SX79 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.01■■□□□ 1.11
Shroom1Q5SX79 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Shroom1Q5SX79 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Shroom1Q5SX79 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shroom1Q5SX79 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms