Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav7d-3Q5R1I1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav7d-3Q5R1I1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-3Q5R1I1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-3Q5R1I1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Gm10420-201ENSMUST00000121713 882 ntBASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Gm12366-201ENSMUST00000121722 873 ntBASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Gm5786-201ENSMUST00000085368 882 ntBASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.19■□□□□ 0.02
Trav7d-3Q5R1I1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-3Q5R1I1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav7d-3Q5R1I1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-3Q5R1I1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav7d-3Q5R1I1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-3Q5R1I1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav7d-3Q5R1I1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav7d-3Q5R1I1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-3Q5R1I1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav7d-3Q5R1I1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-3Q5R1I1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-3Q5R1I1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7d-3Q5R1I1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-3Q5R1I1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-3Q5R1I1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav7d-3Q5R1I1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7d-3Q5R1I1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7d-3Q5R1I1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav7d-3Q5R1I1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav7d-3Q5R1I1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7d-3Q5R1I1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7d-3Q5R1I1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms