Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim63Q38HM4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim63Q38HM4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim63Q38HM4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim63Q38HM4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim63Q38HM4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim63Q38HM4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim63Q38HM4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim63Q38HM4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim63Q38HM4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim63Q38HM4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trim63Q38HM4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim63Q38HM4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim63Q38HM4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim63Q38HM4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim63Q38HM4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim63Q38HM4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim63Q38HM4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim63Q38HM4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim63Q38HM4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim63Q38HM4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim63Q38HM4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim63Q38HM4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim63Q38HM4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim63Q38HM4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim63Q38HM4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim63Q38HM4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim63Q38HM4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Trim63Q38HM4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim63Q38HM4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim63Q38HM4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim63Q38HM4 Peli2-204ENSMUST00000226513 1320 ntBASIC17.21■□□□□ 0.34
Trim63Q38HM4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim63Q38HM4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim63Q38HM4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim63Q38HM4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.2■□□□□ 0.34
Trim63Q38HM4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim63Q38HM4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim63Q38HM4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim63Q38HM4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.19■□□□□ 0.34
Trim63Q38HM4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim63Q38HM4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim63Q38HM4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim63Q38HM4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim63Q38HM4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trim63Q38HM4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim63Q38HM4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim63Q38HM4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim63Q38HM4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim63Q38HM4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim63Q38HM4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim63Q38HM4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim63Q38HM4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim63Q38HM4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim63Q38HM4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim63Q38HM4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim63Q38HM4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim63Q38HM4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim63Q38HM4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim63Q38HM4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim63Q38HM4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim63Q38HM4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim63Q38HM4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim63Q38HM4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim63Q38HM4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim63Q38HM4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim63Q38HM4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim63Q38HM4 Gm27322-201ENSMUST00000184007 104 ntBASIC17.16■□□□□ 0.34
Trim63Q38HM4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim63Q38HM4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim63Q38HM4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim63Q38HM4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim63Q38HM4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trim63Q38HM4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim63Q38HM4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim63Q38HM4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trim63Q38HM4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim63Q38HM4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim63Q38HM4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim63Q38HM4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim63Q38HM4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim63Q38HM4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim63Q38HM4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim63Q38HM4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim63Q38HM4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Trim63Q38HM4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim63Q38HM4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim63Q38HM4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim63Q38HM4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim63Q38HM4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim63Q38HM4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim63Q38HM4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim63Q38HM4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim63Q38HM4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim63Q38HM4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim63Q38HM4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim63Q38HM4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim63Q38HM4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim63Q38HM4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim63Q38HM4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms