Protein–RNA interactions for Protein: P97742

Cpt1a, Carnitine O-palmitoyltransferase 1, liver isoform, mousemouse

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpt1aP97742 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpt1aP97742 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.3■□□□□ 0.84
Cpt1aP97742 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpt1aP97742 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpt1aP97742 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.29■□□□□ 0.84
Cpt1aP97742 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpt1aP97742 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.29■□□□□ 0.84
Cpt1aP97742 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpt1aP97742 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpt1aP97742 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpt1aP97742 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpt1aP97742 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cpt1aP97742 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.28■□□□□ 0.84
Cpt1aP97742 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.28■□□□□ 0.84
Cpt1aP97742 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpt1aP97742 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpt1aP97742 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpt1aP97742 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.27■□□□□ 0.84
Cpt1aP97742 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpt1aP97742 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpt1aP97742 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cpt1aP97742 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cpt1aP97742 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cpt1aP97742 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cpt1aP97742 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpt1aP97742 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cpt1aP97742 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpt1aP97742 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cpt1aP97742 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpt1aP97742 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpt1aP97742 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpt1aP97742 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.25■□□□□ 0.83
Cpt1aP97742 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpt1aP97742 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.25■□□□□ 0.83
Cpt1aP97742 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
Cpt1aP97742 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.25■□□□□ 0.83
Cpt1aP97742 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cpt1aP97742 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpt1aP97742 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpt1aP97742 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Cpt1aP97742 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpt1aP97742 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Cpt1aP97742 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpt1aP97742 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cpt1aP97742 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.24■□□□□ 0.83
Cpt1aP97742 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.24■□□□□ 0.83
Cpt1aP97742 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpt1aP97742 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpt1aP97742 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.23■□□□□ 0.83
Cpt1aP97742 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpt1aP97742 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpt1aP97742 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpt1aP97742 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpt1aP97742 Gm22238-201ENSMUST00000175222 88 ntBASIC20.23■□□□□ 0.83
Cpt1aP97742 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpt1aP97742 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpt1aP97742 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cpt1aP97742 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpt1aP97742 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpt1aP97742 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpt1aP97742 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpt1aP97742 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpt1aP97742 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cpt1aP97742 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpt1aP97742 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cpt1aP97742 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpt1aP97742 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpt1aP97742 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cpt1aP97742 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cpt1aP97742 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpt1aP97742 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpt1aP97742 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpt1aP97742 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpt1aP97742 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpt1aP97742 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpt1aP97742 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cpt1aP97742 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.21■□□□□ 0.83
Cpt1aP97742 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpt1aP97742 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.21■□□□□ 0.83
Cpt1aP97742 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpt1aP97742 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cpt1aP97742 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpt1aP97742 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Cpt1aP97742 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cpt1aP97742 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpt1aP97742 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpt1aP97742 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.2■□□□□ 0.82
Cpt1aP97742 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpt1aP97742 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpt1aP97742 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpt1aP97742 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpt1aP97742 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpt1aP97742 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cpt1aP97742 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpt1aP97742 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpt1aP97742 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpt1aP97742 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.19■□□□□ 0.82
Cpt1aP97742 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpt1aP97742 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.18■□□□□ 0.82
Cpt1aP97742 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms