Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcaP82350 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SgcaP82350 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SgcaP82350 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SgcaP82350 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SgcaP82350 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcaP82350 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SgcaP82350 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SgcaP82350 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SgcaP82350 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgcaP82350 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SgcaP82350 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.28■□□□□ 0.36
SgcaP82350 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.28■□□□□ 0.36
SgcaP82350 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SgcaP82350 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SgcaP82350 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.27■□□□□ 0.36
SgcaP82350 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SgcaP82350 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SgcaP82350 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcaP82350 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SgcaP82350 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcaP82350 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcaP82350 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcaP82350 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SgcaP82350 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcaP82350 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcaP82350 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.26■□□□□ 0.35
SgcaP82350 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcaP82350 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.26■□□□□ 0.35
SgcaP82350 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SgcaP82350 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.26■□□□□ 0.35
SgcaP82350 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.26■□□□□ 0.35
SgcaP82350 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SgcaP82350 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcaP82350 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcaP82350 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcaP82350 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcaP82350 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcaP82350 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcaP82350 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcaP82350 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.25■□□□□ 0.35
SgcaP82350 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SgcaP82350 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcaP82350 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcaP82350 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcaP82350 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
SgcaP82350 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcaP82350 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SgcaP82350 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcaP82350 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SgcaP82350 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcaP82350 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcaP82350 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcaP82350 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SgcaP82350 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcaP82350 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcaP82350 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcaP82350 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SgcaP82350 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcaP82350 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SgcaP82350 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SgcaP82350 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.23■□□□□ 0.35
SgcaP82350 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SgcaP82350 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcaP82350 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SgcaP82350 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SgcaP82350 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcaP82350 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcaP82350 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SgcaP82350 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcaP82350 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
SgcaP82350 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SgcaP82350 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SgcaP82350 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.22■□□□□ 0.35
SgcaP82350 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.21■□□□□ 0.35
SgcaP82350 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcaP82350 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcaP82350 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcaP82350 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SgcaP82350 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcaP82350 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SgcaP82350 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.21■□□□□ 0.34
SgcaP82350 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SgcaP82350 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SgcaP82350 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcaP82350 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SgcaP82350 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SgcaP82350 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcaP82350 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcaP82350 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SgcaP82350 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.19■□□□□ 0.34
SgcaP82350 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SgcaP82350 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcaP82350 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcaP82350 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcaP82350 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcaP82350 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SgcaP82350 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SgcaP82350 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SgcaP82350 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms