Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lsm3P62311 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Lsm3P62311 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.89■□□□□ 0.61
Lsm3P62311 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.89■□□□□ 0.61
Lsm3P62311 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm3P62311 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm3P62311 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm3P62311 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm3P62311 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lsm3P62311 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Lsm3P62311 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm3P62311 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm3P62311 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.87■□□□□ 0.61
Lsm3P62311 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm3P62311 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm3P62311 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm3P62311 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Lsm3P62311 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm3P62311 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lsm3P62311 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm3P62311 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm3P62311 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm3P62311 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm3P62311 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.86■□□□□ 0.61
Lsm3P62311 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm3P62311 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm3P62311 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm3P62311 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm3P62311 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm3P62311 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm3P62311 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm3P62311 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm3P62311 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.85■□□□□ 0.61
Lsm3P62311 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm3P62311 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm3P62311 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm3P62311 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm3P62311 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm3P62311 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.84■□□□□ 0.61
Lsm3P62311 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm3P62311 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm3P62311 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lsm3P62311 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lsm3P62311 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lsm3P62311 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lsm3P62311 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm3P62311 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm3P62311 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.82■□□□□ 0.6
Lsm3P62311 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.82■□□□□ 0.6
Lsm3P62311 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm3P62311 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm3P62311 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm3P62311 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lsm3P62311 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Lsm3P62311 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm3P62311 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.82■□□□□ 0.6
Lsm3P62311 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lsm3P62311 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm3P62311 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm3P62311 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm3P62311 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm3P62311 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm3P62311 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm3P62311 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm3P62311 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.81■□□□□ 0.6
Lsm3P62311 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm3P62311 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm3P62311 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Lsm3P62311 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm3P62311 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm3P62311 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm3P62311 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.8■□□□□ 0.6
Lsm3P62311 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Lsm3P62311 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm3P62311 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lsm3P62311 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm3P62311 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm3P62311 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm3P62311 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm3P62311 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm3P62311 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm3P62311 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.79■□□□□ 0.6
Lsm3P62311 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.79■□□□□ 0.6
Lsm3P62311 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms