Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.03■□□□□ 0.96
Vps4bP46467 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Vps4bP46467 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps4bP46467 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps4bP46467 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps4bP46467 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps4bP46467 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps4bP46467 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps4bP46467 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Vps4bP46467 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Vps4bP46467 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps4bP46467 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Vps4bP46467 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Vps4bP46467 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Vps4bP46467 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps4bP46467 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vps4bP46467 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps4bP46467 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Vps4bP46467 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps4bP46467 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.01■□□□□ 0.95
Vps4bP46467 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Vps4bP46467 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.01■□□□□ 0.95
Vps4bP46467 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Vps4bP46467 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vps4bP46467 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Vps4bP46467 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vps4bP46467 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps4bP46467 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21■□□□□ 0.95
Vps4bP46467 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps4bP46467 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps4bP46467 Gm28536-201ENSMUST00000190971 1317 ntBASIC21■□□□□ 0.95
Vps4bP46467 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Vps4bP46467 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps4bP46467 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
Vps4bP46467 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.99■□□□□ 0.95
Vps4bP46467 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps4bP46467 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps4bP46467 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.98■□□□□ 0.95
Vps4bP46467 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps4bP46467 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.98■□□□□ 0.95
Vps4bP46467 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps4bP46467 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Vps4bP46467 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vps4bP46467 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps4bP46467 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps4bP46467 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps4bP46467 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.97■□□□□ 0.95
Vps4bP46467 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps4bP46467 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps4bP46467 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps4bP46467 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vps4bP46467 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps4bP46467 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps4bP46467 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Vps4bP46467 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps4bP46467 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps4bP46467 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Vps4bP46467 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Vps4bP46467 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps4bP46467 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps4bP46467 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps4bP46467 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Vps4bP46467 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps4bP46467 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps4bP46467 Gm5812-201ENSMUST00000061073 957 ntBASIC20.95■□□□□ 0.94
Vps4bP46467 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps4bP46467 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps4bP46467 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps4bP46467 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps4bP46467 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps4bP46467 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps4bP46467 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps4bP46467 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps4bP46467 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps4bP46467 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Vps4bP46467 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps4bP46467 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps4bP46467 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps4bP46467 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps4bP46467 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.93■□□□□ 0.94
Vps4bP46467 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps4bP46467 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps4bP46467 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps4bP46467 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps4bP46467 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps4bP46467 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps4bP46467 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps4bP46467 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vps4bP46467 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps4bP46467 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms