Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Hmx3P42581 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hmx3P42581 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmx3P42581 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmx3P42581 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmx3P42581 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.13■□□□□ 0.33
Hmx3P42581 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hmx3P42581 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.13■□□□□ 0.33
Hmx3P42581 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmx3P42581 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmx3P42581 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmx3P42581 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmx3P42581 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmx3P42581 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmx3P42581 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmx3P42581 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmx3P42581 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmx3P42581 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmx3P42581 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmx3P42581 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Hmx3P42581 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmx3P42581 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hmx3P42581 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hmx3P42581 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.1■□□□□ 0.33
Hmx3P42581 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Hmx3P42581 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmx3P42581 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmx3P42581 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmx3P42581 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmx3P42581 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmx3P42581 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmx3P42581 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmx3P42581 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmx3P42581 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmx3P42581 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.09■□□□□ 0.33
Hmx3P42581 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hmx3P42581 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmx3P42581 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hmx3P42581 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmx3P42581 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Hmx3P42581 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmx3P42581 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Hmx3P42581 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Hmx3P42581 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Hmx3P42581 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.08■□□□□ 0.32
Hmx3P42581 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmx3P42581 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hmx3P42581 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmx3P42581 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.08■□□□□ 0.32
Hmx3P42581 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmx3P42581 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hmx3P42581 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.08■□□□□ 0.32
Hmx3P42581 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmx3P42581 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmx3P42581 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmx3P42581 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmx3P42581 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmx3P42581 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.07■□□□□ 0.32
Hmx3P42581 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmx3P42581 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.07■□□□□ 0.32
Hmx3P42581 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.07■□□□□ 0.32
Hmx3P42581 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmx3P42581 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmx3P42581 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmx3P42581 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmx3P42581 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmx3P42581 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmx3P42581 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmx3P42581 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmx3P42581 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmx3P42581 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmx3P42581 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmx3P42581 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmx3P42581 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hmx3P42581 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmx3P42581 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmx3P42581 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmx3P42581 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmx3P42581 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.05■□□□□ 0.32
Hmx3P42581 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmx3P42581 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmx3P42581 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmx3P42581 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmx3P42581 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmx3P42581 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmx3P42581 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmx3P42581 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmx3P42581 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmx3P42581 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmx3P42581 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmx3P42581 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.04■□□□□ 0.32
Hmx3P42581 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmx3P42581 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmx3P42581 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.04■□□□□ 0.32
Hmx3P42581 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hmx3P42581 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmx3P42581 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.03■□□□□ 0.32
Hmx3P42581 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmx3P42581 Gm11175-201ENSMUST00000116172 543 ntBASIC17.03■□□□□ 0.32
Hmx3P42581 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms