Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Sftpa1P35242 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sftpa1P35242 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sftpa1P35242 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.35■□□□□ 0.69
Sftpa1P35242 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sftpa1P35242 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sftpa1P35242 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.35■□□□□ 0.69
Sftpa1P35242 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.35■□□□□ 0.69
Sftpa1P35242 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sftpa1P35242 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sftpa1P35242 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.34■□□□□ 0.69
Sftpa1P35242 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sftpa1P35242 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sftpa1P35242 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sftpa1P35242 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sftpa1P35242 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.34■□□□□ 0.69
Sftpa1P35242 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sftpa1P35242 Gm7291-201ENSMUST00000199147 382 ntBASIC19.34■□□□□ 0.69
Sftpa1P35242 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.34■□□□□ 0.69
Sftpa1P35242 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sftpa1P35242 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sftpa1P35242 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sftpa1P35242 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sftpa1P35242 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sftpa1P35242 Gm26571-201ENSMUST00000181399 666 ntBASIC19.33■□□□□ 0.68
Sftpa1P35242 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sftpa1P35242 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sftpa1P35242 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.33■□□□□ 0.68
Sftpa1P35242 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sftpa1P35242 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sftpa1P35242 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.32■□□□□ 0.68
Sftpa1P35242 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sftpa1P35242 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sftpa1P35242 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sftpa1P35242 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sftpa1P35242 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sftpa1P35242 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sftpa1P35242 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sftpa1P35242 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sftpa1P35242 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sftpa1P35242 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sftpa1P35242 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sftpa1P35242 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sftpa1P35242 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sftpa1P35242 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sftpa1P35242 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sftpa1P35242 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sftpa1P35242 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sftpa1P35242 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.3■□□□□ 0.68
Sftpa1P35242 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sftpa1P35242 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sftpa1P35242 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.29■□□□□ 0.68
Sftpa1P35242 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sftpa1P35242 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sftpa1P35242 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sftpa1P35242 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sftpa1P35242 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.29■□□□□ 0.68
Sftpa1P35242 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Sftpa1P35242 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sftpa1P35242 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sftpa1P35242 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sftpa1P35242 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sftpa1P35242 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sftpa1P35242 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sftpa1P35242 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sftpa1P35242 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sftpa1P35242 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sftpa1P35242 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.27■□□□□ 0.68
Sftpa1P35242 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sftpa1P35242 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.27■□□□□ 0.68
Sftpa1P35242 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sftpa1P35242 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Sftpa1P35242 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sftpa1P35242 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sftpa1P35242 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sftpa1P35242 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sftpa1P35242 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sftpa1P35242 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.26■□□□□ 0.67
Sftpa1P35242 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sftpa1P35242 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sftpa1P35242 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.26■□□□□ 0.67
Sftpa1P35242 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.26■□□□□ 0.67
Sftpa1P35242 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sftpa1P35242 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Sftpa1P35242 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sftpa1P35242 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sftpa1P35242 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sftpa1P35242 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sftpa1P35242 Gm42569-201ENSMUST00000200539 472 ntBASIC19.25■□□□□ 0.67
Sftpa1P35242 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.25■□□□□ 0.67
Sftpa1P35242 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sftpa1P35242 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.24■□□□□ 0.67
Sftpa1P35242 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Sftpa1P35242 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.24■□□□□ 0.67
Sftpa1P35242 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.24■□□□□ 0.67
Sftpa1P35242 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sftpa1P35242 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sftpa1P35242 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sftpa1P35242 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sftpa1P35242 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms