Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.31■□□□□ 0.36
Cd74P04441 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd74P04441 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cd74P04441 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd74P04441 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd74P04441 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd74P04441 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd74P04441 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.3■□□□□ 0.36
Cd74P04441 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd74P04441 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.3■□□□□ 0.36
Cd74P04441 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd74P04441 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cd74P04441 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cd74P04441 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd74P04441 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd74P04441 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.29■□□□□ 0.36
Cd74P04441 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd74P04441 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd74P04441 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd74P04441 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd74P04441 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cd74P04441 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd74P04441 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd74P04441 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd74P04441 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd74P04441 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd74P04441 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Cd74P04441 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd74P04441 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cd74P04441 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd74P04441 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd74P04441 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd74P04441 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd74P04441 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.28■□□□□ 0.36
Cd74P04441 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd74P04441 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd74P04441 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd74P04441 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd74P04441 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd74P04441 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd74P04441 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cd74P04441 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.27■□□□□ 0.36
Cd74P04441 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.27■□□□□ 0.36
Cd74P04441 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cd74P04441 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd74P04441 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd74P04441 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd74P04441 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd74P04441 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd74P04441 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cd74P04441 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd74P04441 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd74P04441 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd74P04441 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.26■□□□□ 0.35
Cd74P04441 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd74P04441 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd74P04441 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.26■□□□□ 0.35
Cd74P04441 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd74P04441 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cd74P04441 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Cd74P04441 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.25■□□□□ 0.35
Cd74P04441 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd74P04441 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.24■□□□□ 0.35
Cd74P04441 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.24■□□□□ 0.35
Cd74P04441 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cd74P04441 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd74P04441 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd74P04441 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.24■□□□□ 0.35
Cd74P04441 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Cd74P04441 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd74P04441 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd74P04441 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd74P04441 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd74P04441 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Cd74P04441 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd74P04441 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cd74P04441 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.23■□□□□ 0.35
Cd74P04441 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.23■□□□□ 0.35
Cd74P04441 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd74P04441 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cd74P04441 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd74P04441 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd74P04441 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd74P04441 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cd74P04441 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cd74P04441 Gm7417-201ENSMUST00000192950 473 ntBASIC17.22■□□□□ 0.35
Cd74P04441 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms