Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Best1O88870 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Best1O88870 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Best1O88870 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Best1O88870 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Best1O88870 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Best1O88870 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Best1O88870 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Best1O88870 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.14■□□□□ 0.81
Best1O88870 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
Best1O88870 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Best1O88870 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Best1O88870 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Best1O88870 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.13■□□□□ 0.81
Best1O88870 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.13■□□□□ 0.81
Best1O88870 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Best1O88870 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.13■□□□□ 0.81
Best1O88870 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Best1O88870 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Best1O88870 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Best1O88870 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.12■□□□□ 0.81
Best1O88870 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Best1O88870 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Best1O88870 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Best1O88870 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Best1O88870 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.11■□□□□ 0.81
Best1O88870 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
Best1O88870 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Best1O88870 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Best1O88870 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Best1O88870 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.1■□□□□ 0.81
Best1O88870 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Best1O88870 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.1■□□□□ 0.81
Best1O88870 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Best1O88870 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Best1O88870 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Best1O88870 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Best1O88870 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Best1O88870 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Best1O88870 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.09■□□□□ 0.81
Best1O88870 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Best1O88870 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.09■□□□□ 0.81
Best1O88870 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Best1O88870 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Best1O88870 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Best1O88870 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Best1O88870 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Best1O88870 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Best1O88870 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Best1O88870 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Best1O88870 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Best1O88870 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.08■□□□□ 0.81
Best1O88870 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Best1O88870 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Best1O88870 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Best1O88870 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Best1O88870 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Best1O88870 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Best1O88870 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Best1O88870 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Best1O88870 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.07■□□□□ 0.8
Best1O88870 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Best1O88870 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Best1O88870 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Best1O88870 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Best1O88870 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Best1O88870 Gm12821-201ENSMUST00000120022 600 ntBASIC20.06■□□□□ 0.8
Best1O88870 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.06■□□□□ 0.8
Best1O88870 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.06■□□□□ 0.8
Best1O88870 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Best1O88870 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.05■□□□□ 0.8
Best1O88870 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best1O88870 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Best1O88870 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best1O88870 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.05■□□□□ 0.8
Best1O88870 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.04■□□□□ 0.8
Best1O88870 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.03■□□□□ 0.8
Best1O88870 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Best1O88870 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Best1O88870 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Best1O88870 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Best1O88870 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.03■□□□□ 0.8
Best1O88870 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Best1O88870 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Best1O88870 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Best1O88870 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Best1O88870 Gm15039-201ENSMUST00000118914 875 ntBASIC20.02■□□□□ 0.8
Best1O88870 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Best1O88870 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.02■□□□□ 0.8
Best1O88870 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.02■□□□□ 0.8
Best1O88870 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.02■□□□□ 0.8
Best1O88870 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Best1O88870 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.02■□□□□ 0.8
Best1O88870 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Best1O88870 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Best1O88870 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.02■□□□□ 0.79
Best1O88870 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Best1O88870 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Best1O88870 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Best1O88870 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms