Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Mmp8O70138 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Mmp8O70138 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC25.58■■□□□ 1.69
Mmp8O70138 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC25.58■■□□□ 1.69
Mmp8O70138 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Mmp8O70138 Gm45102-201ENSMUST00000207427 857 ntBASIC25.58■■□□□ 1.69
Mmp8O70138 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Mmp8O70138 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC25.57■■□□□ 1.68
Mmp8O70138 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC25.57■■□□□ 1.68
Mmp8O70138 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Mmp8O70138 Gm44949-201ENSMUST00000206423 1450 ntBASIC25.57■■□□□ 1.68
Mmp8O70138 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Mmp8O70138 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Mmp8O70138 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Mmp8O70138 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Mmp8O70138 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
Mmp8O70138 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Mmp8O70138 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC25.56■■□□□ 1.68
Mmp8O70138 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.56■■□□□ 1.68
Mmp8O70138 Etf1-202ENSMUST00000180351 108 ntBASIC25.56■■□□□ 1.68
Mmp8O70138 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Mmp8O70138 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Mmp8O70138 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Mmp8O70138 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Mmp8O70138 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Mmp8O70138 Gm4430-201ENSMUST00000192413 1943 ntBASIC25.55■■□□□ 1.68
Mmp8O70138 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.55■■□□□ 1.68
Mmp8O70138 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.55■■□□□ 1.68
Mmp8O70138 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.55■■□□□ 1.68
Mmp8O70138 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Mmp8O70138 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Mmp8O70138 Gm14117-201ENSMUST00000122417 843 ntBASIC25.54■■□□□ 1.68
Mmp8O70138 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Mmp8O70138 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Mmp8O70138 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Mmp8O70138 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.53■■□□□ 1.68
Mmp8O70138 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Mmp8O70138 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Mmp8O70138 Rps24-207ENSMUST00000224568 714 ntBASIC25.53■■□□□ 1.68
Mmp8O70138 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.53■■□□□ 1.68
Mmp8O70138 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Mmp8O70138 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Mmp8O70138 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Mmp8O70138 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Mmp8O70138 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC25.52■■□□□ 1.68
Mmp8O70138 Gm7417-201ENSMUST00000192950 473 ntBASIC25.52■■□□□ 1.68
Mmp8O70138 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.52■■□□□ 1.68
Mmp8O70138 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Mmp8O70138 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Mmp8O70138 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Mmp8O70138 Gm5913-201ENSMUST00000119397 1399 ntBASIC25.52■■□□□ 1.68
Mmp8O70138 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC25.52■■□□□ 1.68
Mmp8O70138 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Mmp8O70138 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Mmp8O70138 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Mmp8O70138 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Mmp8O70138 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Mmp8O70138 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Mmp8O70138 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Mmp8O70138 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC25.5■■□□□ 1.67
Mmp8O70138 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Mmp8O70138 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Mmp8O70138 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Mmp8O70138 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Mmp8O70138 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Mmp8O70138 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Mmp8O70138 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Mmp8O70138 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Mmp8O70138 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Mmp8O70138 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Mmp8O70138 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Mmp8O70138 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Mmp8O70138 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Mmp8O70138 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Mmp8O70138 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Mmp8O70138 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC25.46■■□□□ 1.67
Mmp8O70138 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Mmp8O70138 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Mmp8O70138 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Mmp8O70138 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Mmp8O70138 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Mmp8O70138 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Mmp8O70138 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC25.46■■□□□ 1.67
Mmp8O70138 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Mmp8O70138 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Mmp8O70138 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.44■■□□□ 1.66
Mmp8O70138 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Mmp8O70138 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Mmp8O70138 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC25.43■■□□□ 1.66
Mmp8O70138 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Mmp8O70138 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.43■■□□□ 1.66
Mmp8O70138 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Mmp8O70138 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Mmp8O70138 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Mmp8O70138 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Mmp8O70138 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Mmp8O70138 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Mmp8O70138 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Mmp8O70138 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Mmp8O70138 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms