Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaO55042 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.12■□□□□ 0.33
SncaO55042 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaO55042 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaO55042 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaO55042 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaO55042 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SncaO55042 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaO55042 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SncaO55042 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.11■□□□□ 0.33
SncaO55042 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.11■□□□□ 0.33
SncaO55042 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaO55042 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaO55042 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaO55042 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SncaO55042 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SncaO55042 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SncaO55042 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SncaO55042 Gm14523-201ENSMUST00000117260 558 ntBASIC17.1■□□□□ 0.33
SncaO55042 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.1■□□□□ 0.33
SncaO55042 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SncaO55042 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SncaO55042 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SncaO55042 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SncaO55042 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SncaO55042 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.09■□□□□ 0.33
SncaO55042 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.09■□□□□ 0.33
SncaO55042 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SncaO55042 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
SncaO55042 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SncaO55042 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SncaO55042 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SncaO55042 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SncaO55042 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SncaO55042 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SncaO55042 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SncaO55042 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SncaO55042 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.08■□□□□ 0.32
SncaO55042 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SncaO55042 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SncaO55042 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SncaO55042 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SncaO55042 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SncaO55042 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SncaO55042 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SncaO55042 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SncaO55042 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SncaO55042 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SncaO55042 Gm7332-201ENSMUST00000118351 454 ntBASIC17.07■□□□□ 0.32
SncaO55042 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SncaO55042 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SncaO55042 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.07■□□□□ 0.32
SncaO55042 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SncaO55042 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SncaO55042 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.06■□□□□ 0.32
SncaO55042 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SncaO55042 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.06■□□□□ 0.32
SncaO55042 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SncaO55042 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SncaO55042 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SncaO55042 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SncaO55042 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SncaO55042 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SncaO55042 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SncaO55042 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SncaO55042 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SncaO55042 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.04■□□□□ 0.32
SncaO55042 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SncaO55042 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SncaO55042 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.04■□□□□ 0.32
SncaO55042 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.04■□□□□ 0.32
SncaO55042 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SncaO55042 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.03■□□□□ 0.32
SncaO55042 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SncaO55042 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SncaO55042 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
SncaO55042 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SncaO55042 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.03■□□□□ 0.32
SncaO55042 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SncaO55042 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SncaO55042 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SncaO55042 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.03■□□□□ 0.32
SncaO55042 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SncaO55042 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SncaO55042 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.02■□□□□ 0.32
SncaO55042 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SncaO55042 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SncaO55042 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SncaO55042 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms