Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.05■□□□□ 0.64
Hps1O08983 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hps1O08983 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Hps1O08983 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Hps1O08983 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.05■□□□□ 0.64
Hps1O08983 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hps1O08983 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hps1O08983 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hps1O08983 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.04■□□□□ 0.64
Hps1O08983 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Hps1O08983 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hps1O08983 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hps1O08983 Gm44428-201ENSMUST00000204474 874 ntBASIC19.04■□□□□ 0.64
Hps1O08983 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hps1O08983 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hps1O08983 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hps1O08983 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hps1O08983 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hps1O08983 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hps1O08983 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Hps1O08983 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.03■□□□□ 0.64
Hps1O08983 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hps1O08983 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Hps1O08983 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hps1O08983 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hps1O08983 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hps1O08983 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hps1O08983 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hps1O08983 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Hps1O08983 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.02■□□□□ 0.64
Hps1O08983 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.02■□□□□ 0.64
Hps1O08983 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hps1O08983 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.02■□□□□ 0.64
Hps1O08983 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hps1O08983 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hps1O08983 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hps1O08983 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hps1O08983 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hps1O08983 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.01■□□□□ 0.63
Hps1O08983 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.01■□□□□ 0.63
Hps1O08983 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hps1O08983 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hps1O08983 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Hps1O08983 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hps1O08983 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hps1O08983 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19■□□□□ 0.63
Hps1O08983 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hps1O08983 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hps1O08983 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hps1O08983 Gm43566-201ENSMUST00000196851 808 ntBASIC19■□□□□ 0.63
Hps1O08983 Nsd1-203ENSMUST00000224156 1149 ntBASIC19■□□□□ 0.63
Hps1O08983 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hps1O08983 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hps1O08983 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19■□□□□ 0.63
Hps1O08983 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hps1O08983 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hps1O08983 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19■□□□□ 0.63
Hps1O08983 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hps1O08983 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Hps1O08983 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hps1O08983 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hps1O08983 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hps1O08983 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.99■□□□□ 0.63
Hps1O08983 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hps1O08983 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Hps1O08983 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hps1O08983 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hps1O08983 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hps1O08983 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.98■□□□□ 0.63
Hps1O08983 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hps1O08983 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Hps1O08983 Gm45102-201ENSMUST00000207427 857 ntBASIC18.98■□□□□ 0.63
Hps1O08983 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Hps1O08983 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hps1O08983 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hps1O08983 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hps1O08983 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hps1O08983 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.97■□□□□ 0.63
Hps1O08983 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hps1O08983 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hps1O08983 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hps1O08983 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hps1O08983 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hps1O08983 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Hps1O08983 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hps1O08983 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hps1O08983 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hps1O08983 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hps1O08983 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.96■□□□□ 0.63
Hps1O08983 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hps1O08983 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.96■□□□□ 0.63
Hps1O08983 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hps1O08983 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.96■□□□□ 0.63
Hps1O08983 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hps1O08983 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Hps1O08983 Iqck-206ENSMUST00000208658 2891 ntBASIC18.95■□□□□ 0.62
Hps1O08983 Gm14117-201ENSMUST00000122417 843 ntBASIC18.95■□□□□ 0.62
Hps1O08983 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hps1O08983 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.95■□□□□ 0.62
Hps1O08983 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms