Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Scarna2-201ENSMUST00000157560 414 ntBASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Gm16437-201ENSMUST00000025669 507 ntBASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa8J3QNX5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.92■□□□□ 0.62
Shisa8J3QNX5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa8J3QNX5 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.9■□□□□ 0.62
Shisa8J3QNX5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Shisa8J3QNX5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shisa8J3QNX5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shisa8J3QNX5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shisa8J3QNX5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shisa8J3QNX5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shisa8J3QNX5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.9■□□□□ 0.62
Shisa8J3QNX5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shisa8J3QNX5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shisa8J3QNX5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa8J3QNX5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa8J3QNX5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Shisa8J3QNX5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.89■□□□□ 0.61
Shisa8J3QNX5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Shisa8J3QNX5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa8J3QNX5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa8J3QNX5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa8J3QNX5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa8J3QNX5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa8J3QNX5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa8J3QNX5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.87■□□□□ 0.61
Shisa8J3QNX5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shisa8J3QNX5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.87■□□□□ 0.61
Shisa8J3QNX5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shisa8J3QNX5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Shisa8J3QNX5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shisa8J3QNX5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shisa8J3QNX5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shisa8J3QNX5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shisa8J3QNX5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shisa8J3QNX5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Gm9806-201ENSMUST00000051080 552 ntBASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa8J3QNX5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shisa8J3QNX5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Shisa8J3QNX5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Shisa8J3QNX5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Shisa8J3QNX5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa8J3QNX5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa8J3QNX5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa8J3QNX5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa8J3QNX5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa8J3QNX5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa8J3QNX5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms