Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sgo2bJ3QMK1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sgo2bJ3QMK1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.73■□□□□ 0.91
Sgo2bJ3QMK1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sgo2bJ3QMK1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Sgo2bJ3QMK1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sgo2bJ3QMK1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sgo2bJ3QMK1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sgo2bJ3QMK1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sgo2bJ3QMK1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sgo2bJ3QMK1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sgo2bJ3QMK1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.71■□□□□ 0.91
Sgo2bJ3QMK1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sgo2bJ3QMK1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sgo2bJ3QMK1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sgo2bJ3QMK1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sgo2bJ3QMK1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Sgo2bJ3QMK1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Sgo2bJ3QMK1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Sgo2bJ3QMK1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sgo2bJ3QMK1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sgo2bJ3QMK1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sgo2bJ3QMK1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sgo2bJ3QMK1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sgo2bJ3QMK1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sgo2bJ3QMK1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sgo2bJ3QMK1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Sgo2bJ3QMK1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Sgo2bJ3QMK1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sgo2bJ3QMK1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sgo2bJ3QMK1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Sgo2bJ3QMK1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Sgo2bJ3QMK1 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.67■□□□□ 0.9
Sgo2bJ3QMK1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sgo2bJ3QMK1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sgo2bJ3QMK1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sgo2bJ3QMK1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sgo2bJ3QMK1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.66■□□□□ 0.9
Sgo2bJ3QMK1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sgo2bJ3QMK1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sgo2bJ3QMK1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sgo2bJ3QMK1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sgo2bJ3QMK1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sgo2bJ3QMK1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Sgo2bJ3QMK1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sgo2bJ3QMK1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sgo2bJ3QMK1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.65■□□□□ 0.9
Sgo2bJ3QMK1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.65■□□□□ 0.9
Sgo2bJ3QMK1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sgo2bJ3QMK1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sgo2bJ3QMK1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sgo2bJ3QMK1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.64■□□□□ 0.89
Sgo2bJ3QMK1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sgo2bJ3QMK1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sgo2bJ3QMK1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sgo2bJ3QMK1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sgo2bJ3QMK1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sgo2bJ3QMK1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sgo2bJ3QMK1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sgo2bJ3QMK1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sgo2bJ3QMK1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sgo2bJ3QMK1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sgo2bJ3QMK1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms