Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.17□□□□□ -0.46
Herc1E9PZP8 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.17□□□□□ -0.46
Herc1E9PZP8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Gm37856-201ENSMUST00000191634 999 ntBASIC12.17□□□□□ -0.46
Herc1E9PZP8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Gm10812-201ENSMUST00000099864 546 ntBASIC12.16□□□□□ -0.46
Herc1E9PZP8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.16□□□□□ -0.46
Herc1E9PZP8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Gm10620-201ENSMUST00000098379 1332 ntBASIC12.16□□□□□ -0.46
Herc1E9PZP8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Gm20049-201ENSMUST00000219950 730 ntBASIC12.15□□□□□ -0.46
Herc1E9PZP8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc1E9PZP8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc1E9PZP8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc1E9PZP8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Herc1E9PZP8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.15□□□□□ -0.46
Herc1E9PZP8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc1E9PZP8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.15□□□□□ -0.47
Herc1E9PZP8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Herc1E9PZP8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.15□□□□□ -0.47
Herc1E9PZP8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.15□□□□□ -0.47
Herc1E9PZP8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.15□□□□□ -0.47
Herc1E9PZP8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc1E9PZP8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc1E9PZP8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc1E9PZP8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Smad6-203ENSMUST00000179458 273 ntBASIC12.13□□□□□ -0.47
Herc1E9PZP8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Gm15565-201ENSMUST00000118890 427 ntBASIC12.13□□□□□ -0.47
Herc1E9PZP8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Gm42778-201ENSMUST00000199644 553 ntBASIC12.13□□□□□ -0.47
Herc1E9PZP8 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.13□□□□□ -0.47
Herc1E9PZP8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Gm13148-201ENSMUST00000118892 745 ntBASIC12.12□□□□□ -0.47
Herc1E9PZP8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Herc1E9PZP8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Gm715-201ENSMUST00000117865 831 ntBASIC12.12□□□□□ -0.47
Herc1E9PZP8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.11□□□□□ -0.47
Herc1E9PZP8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Gm21362-201ENSMUST00000194272 928 ntBASIC12.1□□□□□ -0.47
Herc1E9PZP8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms