Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.17□□□□□ -0.46
Herc1E9PZP8 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.17□□□□□ -0.46
Herc1E9PZP8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Gm37856-201ENSMUST00000191634 999 ntBASIC12.17□□□□□ -0.46
Herc1E9PZP8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Herc1E9PZP8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Gm10812-201ENSMUST00000099864 546 ntBASIC12.16□□□□□ -0.46
Herc1E9PZP8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.16□□□□□ -0.46
Herc1E9PZP8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Gm10620-201ENSMUST00000098379 1332 ntBASIC12.16□□□□□ -0.46
Herc1E9PZP8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Herc1E9PZP8 Gm20049-201ENSMUST00000219950 730 ntBASIC12.15□□□□□ -0.46
Herc1E9PZP8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc1E9PZP8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc1E9PZP8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc1E9PZP8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Herc1E9PZP8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.15□□□□□ -0.46
Herc1E9PZP8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc1E9PZP8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.15□□□□□ -0.47
Herc1E9PZP8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Herc1E9PZP8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.15□□□□□ -0.47
Herc1E9PZP8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.15□□□□□ -0.47
Herc1E9PZP8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.15□□□□□ -0.47
Herc1E9PZP8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc1E9PZP8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc1E9PZP8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc1E9PZP8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.14□□□□□ -0.47
Herc1E9PZP8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Smad6-203ENSMUST00000179458 273 ntBASIC12.13□□□□□ -0.47
Herc1E9PZP8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Gm15565-201ENSMUST00000118890 427 ntBASIC12.13□□□□□ -0.47
Herc1E9PZP8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Gm42778-201ENSMUST00000199644 553 ntBASIC12.13□□□□□ -0.47
Herc1E9PZP8 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.13□□□□□ -0.47
Herc1E9PZP8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Herc1E9PZP8 Gm13148-201ENSMUST00000118892 745 ntBASIC12.12□□□□□ -0.47
Herc1E9PZP8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Herc1E9PZP8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Gm715-201ENSMUST00000117865 831 ntBASIC12.12□□□□□ -0.47
Herc1E9PZP8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc1E9PZP8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.11□□□□□ -0.47
Herc1E9PZP8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC12.11□□□□□ -0.47
Herc1E9PZP8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Gm21362-201ENSMUST00000194272 928 ntBASIC12.1□□□□□ -0.47
Herc1E9PZP8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Herc1E9PZP8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 139 ms