Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trbv17A0A140T8P8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Gm43566-201ENSMUST00000196851 808 ntBASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv17A0A140T8P8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv17A0A140T8P8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv17A0A140T8P8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Trbv17A0A140T8P8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv17A0A140T8P8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv17A0A140T8P8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trbv17A0A140T8P8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv17A0A140T8P8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv17A0A140T8P8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv17A0A140T8P8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv17A0A140T8P8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv17A0A140T8P8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv17A0A140T8P8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv17A0A140T8P8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv17A0A140T8P8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv17A0A140T8P8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv17A0A140T8P8 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.81■□□□□ 0.12
Trbv17A0A140T8P8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trbv17A0A140T8P8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv17A0A140T8P8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
Trbv17A0A140T8P8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv17A0A140T8P8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv17A0A140T8P8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv17A0A140T8P8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv17A0A140T8P8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv17A0A140T8P8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv17A0A140T8P8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv17A0A140T8P8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv17A0A140T8P8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv17A0A140T8P8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Trbv17A0A140T8P8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.77■□□□□ 0.12
Trbv17A0A140T8P8 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.77■□□□□ 0.12
Trbv17A0A140T8P8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trbv17A0A140T8P8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms