Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav8n-2A0A075B633 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav8n-2A0A075B633 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav8n-2A0A075B633 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav8n-2A0A075B633 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav8n-2A0A075B633 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav8n-2A0A075B633 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav8n-2A0A075B633 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav8n-2A0A075B633 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav8n-2A0A075B633 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8n-2A0A075B633 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Trav8n-2A0A075B633 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trav8n-2A0A075B633 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8n-2A0A075B633 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8n-2A0A075B633 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trav8n-2A0A075B633 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8n-2A0A075B633 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8n-2A0A075B633 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trav8n-2A0A075B633 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.16■□□□□ 0.66
Trav8n-2A0A075B633 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8n-2A0A075B633 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8n-2A0A075B633 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8n-2A0A075B633 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trav8n-2A0A075B633 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8n-2A0A075B633 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav8n-2A0A075B633 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trav8n-2A0A075B633 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav8n-2A0A075B633 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav8n-2A0A075B633 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.15■□□□□ 0.66
Trav8n-2A0A075B633 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.14■□□□□ 0.66
Trav8n-2A0A075B633 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8n-2A0A075B633 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8n-2A0A075B633 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav8n-2A0A075B633 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav8n-2A0A075B633 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav8n-2A0A075B633 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav8n-2A0A075B633 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trav8n-2A0A075B633 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8n-2A0A075B633 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8n-2A0A075B633 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8n-2A0A075B633 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav8n-2A0A075B633 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8n-2A0A075B633 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8n-2A0A075B633 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8n-2A0A075B633 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav8n-2A0A075B633 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav8n-2A0A075B633 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav8n-2A0A075B633 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Trav8n-2A0A075B633 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav8n-2A0A075B633 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.11■□□□□ 0.65
Trav8n-2A0A075B633 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav8n-2A0A075B633 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav8n-2A0A075B633 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav8n-2A0A075B633 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav8n-2A0A075B633 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
Trav8n-2A0A075B633 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.1■□□□□ 0.65
Trav8n-2A0A075B633 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav8n-2A0A075B633 Gm5874-201ENSMUST00000096101 508 ntBASIC19.1■□□□□ 0.65
Trav8n-2A0A075B633 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav8n-2A0A075B633 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav8n-2A0A075B633 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trav8n-2A0A075B633 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav8n-2A0A075B633 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav8n-2A0A075B633 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav8n-2A0A075B633 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav8n-2A0A075B633 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trav8n-2A0A075B633 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav8n-2A0A075B633 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav8n-2A0A075B633 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trav8n-2A0A075B633 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav8n-2A0A075B633 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.08■□□□□ 0.64
Trav8n-2A0A075B633 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.08■□□□□ 0.64
Trav8n-2A0A075B633 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trav8n-2A0A075B633 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav8n-2A0A075B633 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav8n-2A0A075B633 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav8n-2A0A075B633 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav8n-2A0A075B633 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav8n-2A0A075B633 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav8n-2A0A075B633 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav8n-2A0A075B633 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav8n-2A0A075B633 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav8n-2A0A075B633 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav8n-2A0A075B633 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav8n-2A0A075B633 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav8n-2A0A075B633 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
Trav8n-2A0A075B633 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trav8n-2A0A075B633 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav8n-2A0A075B633 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav8n-2A0A075B633 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms