Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-4A0A075B620 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7n-4A0A075B620 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-4A0A075B620 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7n-4A0A075B620 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7n-4A0A075B620 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7n-4A0A075B620 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Trav7n-4A0A075B620 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav7n-4A0A075B620 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.66■□□□□ 0.1
Trav7n-4A0A075B620 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav7n-4A0A075B620 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7n-4A0A075B620 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7n-4A0A075B620 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7n-4A0A075B620 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7n-4A0A075B620 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7n-4A0A075B620 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7n-4A0A075B620 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7n-4A0A075B620 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7n-4A0A075B620 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.65■□□□□ 0.1
Trav7n-4A0A075B620 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7n-4A0A075B620 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7n-4A0A075B620 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7n-4A0A075B620 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav7n-4A0A075B620 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7n-4A0A075B620 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7n-4A0A075B620 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms