Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-1A0A075B5Z8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-1A0A075B5Z8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-1A0A075B5Z8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.73■□□□□ 0.27
Trav6-1A0A075B5Z8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-1A0A075B5Z8 Gm11687-201ENSMUST00000118911 886 ntBASIC16.73■□□□□ 0.27
Trav6-1A0A075B5Z8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-1A0A075B5Z8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-1A0A075B5Z8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-1A0A075B5Z8 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.72■□□□□ 0.27
Trav6-1A0A075B5Z8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-1A0A075B5Z8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-1A0A075B5Z8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-1A0A075B5Z8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-1A0A075B5Z8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-1A0A075B5Z8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-1A0A075B5Z8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-1A0A075B5Z8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-1A0A075B5Z8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav6-1A0A075B5Z8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-1A0A075B5Z8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-1A0A075B5Z8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-1A0A075B5Z8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-1A0A075B5Z8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-1A0A075B5Z8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.71■□□□□ 0.27
Trav6-1A0A075B5Z8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-1A0A075B5Z8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-1A0A075B5Z8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-1A0A075B5Z8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-1A0A075B5Z8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-1A0A075B5Z8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav6-1A0A075B5Z8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-1A0A075B5Z8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav6-1A0A075B5Z8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-1A0A075B5Z8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-1A0A075B5Z8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-1A0A075B5Z8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-1A0A075B5Z8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-1A0A075B5Z8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-1A0A075B5Z8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-1A0A075B5Z8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-1A0A075B5Z8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav6-1A0A075B5Z8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms