Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb1S4R1E0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb1S4R1E0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb1S4R1E0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb1S4R1E0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
H2afb1S4R1E0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
H2afb1S4R1E0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H2afb1S4R1E0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
H2afb1S4R1E0 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.83■□□□□ 0.6
H2afb1S4R1E0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H2afb1S4R1E0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
H2afb1S4R1E0 Gm7332-201ENSMUST00000118351 454 ntBASIC18.82■□□□□ 0.6
H2afb1S4R1E0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.82■□□□□ 0.6
H2afb1S4R1E0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb1S4R1E0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb1S4R1E0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
H2afb1S4R1E0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb1S4R1E0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb1S4R1E0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb1S4R1E0 Gm11175-201ENSMUST00000116172 543 ntBASIC18.81■□□□□ 0.6
H2afb1S4R1E0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.81■□□□□ 0.6
H2afb1S4R1E0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.81■□□□□ 0.6
H2afb1S4R1E0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
H2afb1S4R1E0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb1S4R1E0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb1S4R1E0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1S4R1E0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1S4R1E0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1S4R1E0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.8■□□□□ 0.6
H2afb1S4R1E0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1S4R1E0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1S4R1E0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1S4R1E0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1S4R1E0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb1S4R1E0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
H2afb1S4R1E0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb1S4R1E0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb1S4R1E0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.79■□□□□ 0.6
H2afb1S4R1E0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb1S4R1E0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb1S4R1E0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb1S4R1E0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1S4R1E0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Iqck-206ENSMUST00000208658 2891 ntBASIC18.77■□□□□ 0.6
H2afb1S4R1E0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2afb1S4R1E0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
H2afb1S4R1E0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2afb1S4R1E0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2afb1S4R1E0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2afb1S4R1E0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
H2afb1S4R1E0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
H2afb1S4R1E0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1S4R1E0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.75■□□□□ 0.59
H2afb1S4R1E0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1S4R1E0 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.75■□□□□ 0.59
H2afb1S4R1E0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1S4R1E0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
H2afb1S4R1E0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1S4R1E0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1S4R1E0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1S4R1E0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1S4R1E0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1S4R1E0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1S4R1E0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1S4R1E0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1S4R1E0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1S4R1E0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms