Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.4■□□□□ 0.86
Cdh17Q9R100 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh17Q9R100 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh17Q9R100 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cdh17Q9R100 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdh17Q9R100 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh17Q9R100 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh17Q9R100 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Cdh17Q9R100 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Cdh17Q9R100 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh17Q9R100 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.39■□□□□ 0.85
Cdh17Q9R100 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cdh17Q9R100 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh17Q9R100 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh17Q9R100 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh17Q9R100 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh17Q9R100 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh17Q9R100 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh17Q9R100 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh17Q9R100 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh17Q9R100 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Cdh17Q9R100 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cdh17Q9R100 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh17Q9R100 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.38■□□□□ 0.85
Cdh17Q9R100 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh17Q9R100 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh17Q9R100 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh17Q9R100 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.37■□□□□ 0.85
Cdh17Q9R100 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh17Q9R100 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Cdh17Q9R100 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh17Q9R100 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh17Q9R100 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh17Q9R100 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh17Q9R100 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh17Q9R100 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh17Q9R100 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh17Q9R100 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.36■□□□□ 0.85
Cdh17Q9R100 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdh17Q9R100 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdh17Q9R100 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh17Q9R100 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh17Q9R100 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh17Q9R100 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh17Q9R100 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh17Q9R100 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh17Q9R100 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Cdh17Q9R100 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh17Q9R100 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cdh17Q9R100 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh17Q9R100 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh17Q9R100 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh17Q9R100 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh17Q9R100 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh17Q9R100 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh17Q9R100 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh17Q9R100 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cdh17Q9R100 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh17Q9R100 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh17Q9R100 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdh17Q9R100 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdh17Q9R100 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh17Q9R100 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh17Q9R100 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cdh17Q9R100 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh17Q9R100 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh17Q9R100 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh17Q9R100 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.33■□□□□ 0.85
Cdh17Q9R100 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.33■□□□□ 0.85
Cdh17Q9R100 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh17Q9R100 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh17Q9R100 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Cdh17Q9R100 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.33■□□□□ 0.84
Cdh17Q9R100 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.84
Cdh17Q9R100 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh17Q9R100 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh17Q9R100 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cdh17Q9R100 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh17Q9R100 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh17Q9R100 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh17Q9R100 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.32■□□□□ 0.84
Cdh17Q9R100 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh17Q9R100 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh17Q9R100 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cdh17Q9R100 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cdh17Q9R100 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh17Q9R100 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cdh17Q9R100 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.31■□□□□ 0.84
Cdh17Q9R100 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.31■□□□□ 0.84
Cdh17Q9R100 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh17Q9R100 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh17Q9R100 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh17Q9R100 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh17Q9R100 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh17Q9R100 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cdh17Q9R100 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.3■□□□□ 0.84
Cdh17Q9R100 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh17Q9R100 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.3■□□□□ 0.84
Cdh17Q9R100 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh17Q9R100 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms