Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chrna6Q9R0W9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chrna6Q9R0W9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.27■■□□□ 1
Chrna6Q9R0W9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.27■■□□□ 1
Chrna6Q9R0W9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Chrna6Q9R0W9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna6Q9R0W9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.26■□□□□ 0.99
Chrna6Q9R0W9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.26■□□□□ 0.99
Chrna6Q9R0W9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna6Q9R0W9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna6Q9R0W9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna6Q9R0W9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna6Q9R0W9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Chrna6Q9R0W9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.26■□□□□ 0.99
Chrna6Q9R0W9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna6Q9R0W9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna6Q9R0W9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna6Q9R0W9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna6Q9R0W9 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.25■□□□□ 0.99
Chrna6Q9R0W9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.25■□□□□ 0.99
Chrna6Q9R0W9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.25■□□□□ 0.99
Chrna6Q9R0W9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna6Q9R0W9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Chrna6Q9R0W9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.23■□□□□ 0.99
Chrna6Q9R0W9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chrna6Q9R0W9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chrna6Q9R0W9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chrna6Q9R0W9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.23■□□□□ 0.99
Chrna6Q9R0W9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chrna6Q9R0W9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.23■□□□□ 0.99
Chrna6Q9R0W9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chrna6Q9R0W9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chrna6Q9R0W9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.22■□□□□ 0.99
Chrna6Q9R0W9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Chrna6Q9R0W9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chrna6Q9R0W9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.22■□□□□ 0.99
Chrna6Q9R0W9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.21■□□□□ 0.99
Chrna6Q9R0W9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Chrna6Q9R0W9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna6Q9R0W9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Chrna6Q9R0W9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna6Q9R0W9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Chrna6Q9R0W9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna6Q9R0W9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna6Q9R0W9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna6Q9R0W9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna6Q9R0W9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna6Q9R0W9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna6Q9R0W9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna6Q9R0W9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna6Q9R0W9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna6Q9R0W9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna6Q9R0W9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna6Q9R0W9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna6Q9R0W9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna6Q9R0W9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna6Q9R0W9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.18■□□□□ 0.98
Chrna6Q9R0W9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna6Q9R0W9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.17■□□□□ 0.98
Chrna6Q9R0W9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna6Q9R0W9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna6Q9R0W9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Chrna6Q9R0W9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna6Q9R0W9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna6Q9R0W9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
Chrna6Q9R0W9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
Chrna6Q9R0W9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna6Q9R0W9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna6Q9R0W9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna6Q9R0W9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna6Q9R0W9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.15■□□□□ 0.98
Chrna6Q9R0W9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.15■□□□□ 0.98
Chrna6Q9R0W9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna6Q9R0W9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna6Q9R0W9 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.14■□□□□ 0.98
Chrna6Q9R0W9 Gm22238-201ENSMUST00000175222 88 ntBASIC21.14■□□□□ 0.97
Chrna6Q9R0W9 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.14■□□□□ 0.97
Chrna6Q9R0W9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chrna6Q9R0W9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chrna6Q9R0W9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna6Q9R0W9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna6Q9R0W9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna6Q9R0W9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna6Q9R0W9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna6Q9R0W9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.13■□□□□ 0.97
Chrna6Q9R0W9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Chrna6Q9R0W9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna6Q9R0W9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms