Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20aQ9DC33 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20aQ9DC33 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20aQ9DC33 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmg20aQ9DC33 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmg20aQ9DC33 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmg20aQ9DC33 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Hmg20aQ9DC33 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.98■□□□□ 0.63
Hmg20aQ9DC33 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Hmg20aQ9DC33 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmg20aQ9DC33 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Hmg20aQ9DC33 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmg20aQ9DC33 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.97■□□□□ 0.63
Hmg20aQ9DC33 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmg20aQ9DC33 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmg20aQ9DC33 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmg20aQ9DC33 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmg20aQ9DC33 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Hmg20aQ9DC33 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmg20aQ9DC33 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hmg20aQ9DC33 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmg20aQ9DC33 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmg20aQ9DC33 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmg20aQ9DC33 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmg20aQ9DC33 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.95■□□□□ 0.62
Hmg20aQ9DC33 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmg20aQ9DC33 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmg20aQ9DC33 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hmg20aQ9DC33 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.93■□□□□ 0.62
Hmg20aQ9DC33 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmg20aQ9DC33 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.93■□□□□ 0.62
Hmg20aQ9DC33 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmg20aQ9DC33 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmg20aQ9DC33 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.93■□□□□ 0.62
Hmg20aQ9DC33 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmg20aQ9DC33 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.93■□□□□ 0.62
Hmg20aQ9DC33 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Hmg20aQ9DC33 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20aQ9DC33 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20aQ9DC33 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20aQ9DC33 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20aQ9DC33 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.92■□□□□ 0.62
Hmg20aQ9DC33 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Hmg20aQ9DC33 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20aQ9DC33 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20aQ9DC33 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20aQ9DC33 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20aQ9DC33 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20aQ9DC33 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20aQ9DC33 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20aQ9DC33 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.91■□□□□ 0.62
Hmg20aQ9DC33 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.91■□□□□ 0.62
Hmg20aQ9DC33 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.91■□□□□ 0.62
Hmg20aQ9DC33 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20aQ9DC33 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20aQ9DC33 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.9■□□□□ 0.62
Hmg20aQ9DC33 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.9■□□□□ 0.62
Hmg20aQ9DC33 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20aQ9DC33 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20aQ9DC33 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20aQ9DC33 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20aQ9DC33 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hmg20aQ9DC33 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20aQ9DC33 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.89■□□□□ 0.61
Hmg20aQ9DC33 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.89■□□□□ 0.61
Hmg20aQ9DC33 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20aQ9DC33 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Hmg20aQ9DC33 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20aQ9DC33 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20aQ9DC33 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms