Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ssmem1Q9D9Y8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssmem1Q9D9Y8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Ssmem1Q9D9Y8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssmem1Q9D9Y8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.07■□□□□ 0.48
Ssmem1Q9D9Y8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ssmem1Q9D9Y8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ssmem1Q9D9Y8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssmem1Q9D9Y8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ssmem1Q9D9Y8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ssmem1Q9D9Y8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssmem1Q9D9Y8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssmem1Q9D9Y8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssmem1Q9D9Y8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssmem1Q9D9Y8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.06■□□□□ 0.48
Ssmem1Q9D9Y8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.06■□□□□ 0.48
Ssmem1Q9D9Y8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssmem1Q9D9Y8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssmem1Q9D9Y8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ssmem1Q9D9Y8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssmem1Q9D9Y8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.05■□□□□ 0.48
Ssmem1Q9D9Y8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssmem1Q9D9Y8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Ssmem1Q9D9Y8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
Ssmem1Q9D9Y8 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.05■□□□□ 0.48
Ssmem1Q9D9Y8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssmem1Q9D9Y8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssmem1Q9D9Y8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssmem1Q9D9Y8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssmem1Q9D9Y8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssmem1Q9D9Y8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssmem1Q9D9Y8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssmem1Q9D9Y8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssmem1Q9D9Y8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.02■□□□□ 0.48
Ssmem1Q9D9Y8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssmem1Q9D9Y8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.02■□□□□ 0.48
Ssmem1Q9D9Y8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssmem1Q9D9Y8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ssmem1Q9D9Y8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.02■□□□□ 0.47
Ssmem1Q9D9Y8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssmem1Q9D9Y8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ssmem1Q9D9Y8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssmem1Q9D9Y8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ssmem1Q9D9Y8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ssmem1Q9D9Y8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssmem1Q9D9Y8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ssmem1Q9D9Y8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssmem1Q9D9Y8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssmem1Q9D9Y8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssmem1Q9D9Y8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssmem1Q9D9Y8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssmem1Q9D9Y8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ssmem1Q9D9Y8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssmem1Q9D9Y8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18■□□□□ 0.47
Ssmem1Q9D9Y8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Ssmem1Q9D9Y8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18■□□□□ 0.47
Ssmem1Q9D9Y8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssmem1Q9D9Y8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssmem1Q9D9Y8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ssmem1Q9D9Y8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssmem1Q9D9Y8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssmem1Q9D9Y8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssmem1Q9D9Y8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssmem1Q9D9Y8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ssmem1Q9D9Y8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.99■□□□□ 0.47
Ssmem1Q9D9Y8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ssmem1Q9D9Y8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssmem1Q9D9Y8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ssmem1Q9D9Y8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssmem1Q9D9Y8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssmem1Q9D9Y8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssmem1Q9D9Y8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ssmem1Q9D9Y8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ssmem1Q9D9Y8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.98■□□□□ 0.47
Ssmem1Q9D9Y8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssmem1Q9D9Y8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssmem1Q9D9Y8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ssmem1Q9D9Y8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ssmem1Q9D9Y8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssmem1Q9D9Y8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssmem1Q9D9Y8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ssmem1Q9D9Y8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.97■□□□□ 0.47
Ssmem1Q9D9Y8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssmem1Q9D9Y8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssmem1Q9D9Y8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ssmem1Q9D9Y8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms