Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Cdh23Q99PF4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.9■■□□□ 1.1
Cdh23Q99PF4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Cdh23Q99PF4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdh23Q99PF4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdh23Q99PF4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdh23Q99PF4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdh23Q99PF4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cdh23Q99PF4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdh23Q99PF4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cdh23Q99PF4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cdh23Q99PF4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cdh23Q99PF4 Gm42642-201ENSMUST00000200683 355 ntBASIC21.88■■□□□ 1.09
Cdh23Q99PF4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdh23Q99PF4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdh23Q99PF4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdh23Q99PF4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdh23Q99PF4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdh23Q99PF4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Cdh23Q99PF4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdh23Q99PF4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Cdh23Q99PF4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Cdh23Q99PF4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.86■■□□□ 1.09
Cdh23Q99PF4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdh23Q99PF4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Cdh23Q99PF4 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.85■■□□□ 1.09
Cdh23Q99PF4 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.85■■□□□ 1.09
Cdh23Q99PF4 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.85■■□□□ 1.09
Cdh23Q99PF4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdh23Q99PF4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Cdh23Q99PF4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Cdh23Q99PF4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cdh23Q99PF4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdh23Q99PF4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.84■■□□□ 1.09
Cdh23Q99PF4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdh23Q99PF4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdh23Q99PF4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cdh23Q99PF4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Cdh23Q99PF4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.83■■□□□ 1.09
Cdh23Q99PF4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.83■■□□□ 1.09
Cdh23Q99PF4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.83■■□□□ 1.09
Cdh23Q99PF4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdh23Q99PF4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Cdh23Q99PF4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Cdh23Q99PF4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
Cdh23Q99PF4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh23Q99PF4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.82■■□□□ 1.08
Cdh23Q99PF4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh23Q99PF4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh23Q99PF4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.81■■□□□ 1.08
Cdh23Q99PF4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.81■■□□□ 1.08
Cdh23Q99PF4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh23Q99PF4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh23Q99PF4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh23Q99PF4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh23Q99PF4 Gm9870-201ENSMUST00000063874 645 ntBASIC21.81■■□□□ 1.08
Cdh23Q99PF4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.81■■□□□ 1.08
Cdh23Q99PF4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cdh23Q99PF4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh23Q99PF4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh23Q99PF4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh23Q99PF4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh23Q99PF4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh23Q99PF4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Cdh23Q99PF4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh23Q99PF4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh23Q99PF4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh23Q99PF4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.79■■□□□ 1.08
Cdh23Q99PF4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh23Q99PF4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.79■■□□□ 1.08
Cdh23Q99PF4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.79■■□□□ 1.08
Cdh23Q99PF4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh23Q99PF4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh23Q99PF4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh23Q99PF4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh23Q99PF4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.78■■□□□ 1.08
Cdh23Q99PF4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh23Q99PF4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Cdh23Q99PF4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh23Q99PF4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh23Q99PF4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Cdh23Q99PF4 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.78■■□□□ 1.08
Cdh23Q99PF4 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.77■■□□□ 1.08
Cdh23Q99PF4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh23Q99PF4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh23Q99PF4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Cdh23Q99PF4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh23Q99PF4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh23Q99PF4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh23Q99PF4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh23Q99PF4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh23Q99PF4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh23Q99PF4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh23Q99PF4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh23Q99PF4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.75■■□□□ 1.07
Cdh23Q99PF4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh23Q99PF4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh23Q99PF4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cdh23Q99PF4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh23Q99PF4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms