Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.3■□□□□ 0.68
Cdca3Q99M54 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Cdca3Q99M54 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.3■□□□□ 0.68
Cdca3Q99M54 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdca3Q99M54 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdca3Q99M54 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdca3Q99M54 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdca3Q99M54 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Cdca3Q99M54 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdca3Q99M54 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdca3Q99M54 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdca3Q99M54 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Cdca3Q99M54 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdca3Q99M54 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdca3Q99M54 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.29■□□□□ 0.68
Cdca3Q99M54 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdca3Q99M54 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.29■□□□□ 0.68
Cdca3Q99M54 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdca3Q99M54 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdca3Q99M54 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.28■□□□□ 0.68
Cdca3Q99M54 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdca3Q99M54 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdca3Q99M54 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cdca3Q99M54 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.28■□□□□ 0.68
Cdca3Q99M54 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cdca3Q99M54 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdca3Q99M54 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdca3Q99M54 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdca3Q99M54 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdca3Q99M54 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdca3Q99M54 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cdca3Q99M54 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdca3Q99M54 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdca3Q99M54 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Cdca3Q99M54 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdca3Q99M54 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdca3Q99M54 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.26■□□□□ 0.67
Cdca3Q99M54 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdca3Q99M54 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdca3Q99M54 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.25■□□□□ 0.67
Cdca3Q99M54 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Cdca3Q99M54 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdca3Q99M54 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdca3Q99M54 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cdca3Q99M54 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdca3Q99M54 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.24■□□□□ 0.67
Cdca3Q99M54 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdca3Q99M54 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdca3Q99M54 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Cdca3Q99M54 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdca3Q99M54 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdca3Q99M54 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdca3Q99M54 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdca3Q99M54 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdca3Q99M54 Gm9847-201ENSMUST00000052528 599 ntBASIC19.22■□□□□ 0.67
Cdca3Q99M54 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdca3Q99M54 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cdca3Q99M54 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdca3Q99M54 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.21■□□□□ 0.67
Cdca3Q99M54 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdca3Q99M54 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.21■□□□□ 0.67
Cdca3Q99M54 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.21■□□□□ 0.67
Cdca3Q99M54 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cdca3Q99M54 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdca3Q99M54 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdca3Q99M54 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdca3Q99M54 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdca3Q99M54 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.2■□□□□ 0.66
Cdca3Q99M54 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cdca3Q99M54 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdca3Q99M54 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdca3Q99M54 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cdca3Q99M54 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Cdca3Q99M54 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.19■□□□□ 0.66
Cdca3Q99M54 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca3Q99M54 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca3Q99M54 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cdca3Q99M54 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca3Q99M54 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca3Q99M54 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca3Q99M54 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cdca3Q99M54 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cdca3Q99M54 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdca3Q99M54 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.18■□□□□ 0.66
Cdca3Q99M54 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cdca3Q99M54 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdca3Q99M54 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdca3Q99M54 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms