Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb2Q91Y00 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb2Q91Y00 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb2Q91Y00 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Pcdhb2Q91Y00 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb2Q91Y00 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Pcdhb2Q91Y00 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb2Q91Y00 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb2Q91Y00 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdhb2Q91Y00 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb2Q91Y00 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb2Q91Y00 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.19■■□□□ 1.14
Pcdhb2Q91Y00 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb2Q91Y00 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.19■■□□□ 1.14
Pcdhb2Q91Y00 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb2Q91Y00 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb2Q91Y00 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdhb2Q91Y00 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb2Q91Y00 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb2Q91Y00 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Pcdhb2Q91Y00 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb2Q91Y00 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb2Q91Y00 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb2Q91Y00 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdhb2Q91Y00 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb2Q91Y00 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb2Q91Y00 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb2Q91Y00 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.17■■□□□ 1.14
Pcdhb2Q91Y00 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.17■■□□□ 1.14
Pcdhb2Q91Y00 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb2Q91Y00 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb2Q91Y00 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb2Q91Y00 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.16■■□□□ 1.14
Pcdhb2Q91Y00 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb2Q91Y00 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pcdhb2Q91Y00 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb2Q91Y00 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb2Q91Y00 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Pcdhb2Q91Y00 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb2Q91Y00 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.15■■□□□ 1.14
Pcdhb2Q91Y00 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.15■■□□□ 1.14
Pcdhb2Q91Y00 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.15■■□□□ 1.14
Pcdhb2Q91Y00 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Pcdhb2Q91Y00 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhb2Q91Y00 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhb2Q91Y00 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb2Q91Y00 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.14■■□□□ 1.13
Pcdhb2Q91Y00 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb2Q91Y00 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb2Q91Y00 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
Pcdhb2Q91Y00 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb2Q91Y00 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb2Q91Y00 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb2Q91Y00 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb2Q91Y00 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb2Q91Y00 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb2Q91Y00 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb2Q91Y00 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb2Q91Y00 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb2Q91Y00 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Pcdhb2Q91Y00 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Pcdhb2Q91Y00 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb2Q91Y00 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Pcdhb2Q91Y00 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb2Q91Y00 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Pcdhb2Q91Y00 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb2Q91Y00 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb2Q91Y00 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb2Q91Y00 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb2Q91Y00 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb2Q91Y00 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb2Q91Y00 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb2Q91Y00 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb2Q91Y00 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb2Q91Y00 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.09■■□□□ 1.13
Pcdhb2Q91Y00 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.09■■□□□ 1.13
Pcdhb2Q91Y00 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.09■■□□□ 1.13
Pcdhb2Q91Y00 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.09■■□□□ 1.13
Pcdhb2Q91Y00 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Pcdhb2Q91Y00 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
Pcdhb2Q91Y00 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb2Q91Y00 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb2Q91Y00 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb2Q91Y00 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb2Q91Y00 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC22.08■■□□□ 1.12
Pcdhb2Q91Y00 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb2Q91Y00 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb2Q91Y00 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms