Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim60Q8VI40 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim60Q8VI40 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim60Q8VI40 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim60Q8VI40 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
Trim60Q8VI40 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.59■■□□□ 1.05
Trim60Q8VI40 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Trim60Q8VI40 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.59■■□□□ 1.05
Trim60Q8VI40 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim60Q8VI40 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim60Q8VI40 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.58■■□□□ 1.05
Trim60Q8VI40 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim60Q8VI40 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.58■■□□□ 1.05
Trim60Q8VI40 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim60Q8VI40 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.58■■□□□ 1.05
Trim60Q8VI40 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Trim60Q8VI40 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Trim60Q8VI40 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
Trim60Q8VI40 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim60Q8VI40 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim60Q8VI40 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim60Q8VI40 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim60Q8VI40 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim60Q8VI40 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim60Q8VI40 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim60Q8VI40 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim60Q8VI40 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim60Q8VI40 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim60Q8VI40 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim60Q8VI40 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim60Q8VI40 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Trim60Q8VI40 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim60Q8VI40 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Trim60Q8VI40 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim60Q8VI40 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim60Q8VI40 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim60Q8VI40 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim60Q8VI40 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim60Q8VI40 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.55■■□□□ 1.04
Trim60Q8VI40 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim60Q8VI40 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim60Q8VI40 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
Trim60Q8VI40 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim60Q8VI40 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim60Q8VI40 Gm11175-201ENSMUST00000116172 543 ntBASIC21.53■■□□□ 1.04
Trim60Q8VI40 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim60Q8VI40 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.53■■□□□ 1.04
Trim60Q8VI40 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim60Q8VI40 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim60Q8VI40 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim60Q8VI40 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.53■■□□□ 1.04
Trim60Q8VI40 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim60Q8VI40 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim60Q8VI40 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim60Q8VI40 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim60Q8VI40 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim60Q8VI40 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim60Q8VI40 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim60Q8VI40 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim60Q8VI40 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim60Q8VI40 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.51■■□□□ 1.03
Trim60Q8VI40 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim60Q8VI40 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim60Q8VI40 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trim60Q8VI40 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim60Q8VI40 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.5■■□□□ 1.03
Trim60Q8VI40 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.5■■□□□ 1.03
Trim60Q8VI40 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.5■■□□□ 1.03
Trim60Q8VI40 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim60Q8VI40 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim60Q8VI40 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.5■■□□□ 1.03
Trim60Q8VI40 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim60Q8VI40 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim60Q8VI40 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.5■■□□□ 1.03
Trim60Q8VI40 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim60Q8VI40 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim60Q8VI40 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.49■■□□□ 1.03
Trim60Q8VI40 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim60Q8VI40 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim60Q8VI40 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim60Q8VI40 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim60Q8VI40 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim60Q8VI40 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim60Q8VI40 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim60Q8VI40 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim60Q8VI40 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms