Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smim29Q8R043 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smim29Q8R043 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smim29Q8R043 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smim29Q8R043 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC13.24□□□□□ -0.29
Smim29Q8R043 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.24□□□□□ -0.29
Smim29Q8R043 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smim29Q8R043 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smim29Q8R043 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smim29Q8R043 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smim29Q8R043 Gm5987-201ENSMUST00000196433 1151 ntBASIC13.24□□□□□ -0.29
Smim29Q8R043 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smim29Q8R043 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smim29Q8R043 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smim29Q8R043 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smim29Q8R043 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smim29Q8R043 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smim29Q8R043 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smim29Q8R043 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.23□□□□□ -0.29
Smim29Q8R043 AC164883.3-201ENSMUST00000227396 1774 ntBASIC13.23□□□□□ -0.29
Smim29Q8R043 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smim29Q8R043 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.23□□□□□ -0.29
Smim29Q8R043 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.22□□□□□ -0.29
Smim29Q8R043 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smim29Q8R043 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim29Q8R043 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim29Q8R043 Notumos-201ENSMUST00000151998 2659 ntBASIC13.22□□□□□ -0.29
Smim29Q8R043 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim29Q8R043 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim29Q8R043 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smim29Q8R043 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim29Q8R043 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smim29Q8R043 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim29Q8R043 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim29Q8R043 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smim29Q8R043 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim29Q8R043 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.21□□□□□ -0.29
Smim29Q8R043 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim29Q8R043 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim29Q8R043 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim29Q8R043 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim29Q8R043 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim29Q8R043 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smim29Q8R043 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim29Q8R043 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim29Q8R043 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim29Q8R043 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.2□□□□□ -0.3
Smim29Q8R043 Gm12366-201ENSMUST00000121722 873 ntBASIC13.2□□□□□ -0.3
Smim29Q8R043 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.2□□□□□ -0.3
Smim29Q8R043 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.2□□□□□ -0.3
Smim29Q8R043 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smim29Q8R043 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.2□□□□□ -0.3
Smim29Q8R043 Gm5786-201ENSMUST00000085368 882 ntBASIC13.2□□□□□ -0.3
Smim29Q8R043 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smim29Q8R043 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim29Q8R043 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim29Q8R043 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Smim29Q8R043 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim29Q8R043 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.19□□□□□ -0.3
Smim29Q8R043 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.19□□□□□ -0.3
Smim29Q8R043 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smim29Q8R043 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smim29Q8R043 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smim29Q8R043 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smim29Q8R043 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim29Q8R043 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smim29Q8R043 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Smim29Q8R043 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim29Q8R043 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim29Q8R043 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Smim29Q8R043 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim29Q8R043 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.18□□□□□ -0.3
Smim29Q8R043 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Smim29Q8R043 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim29Q8R043 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim29Q8R043 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smim29Q8R043 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.18□□□□□ -0.3
Smim29Q8R043 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim29Q8R043 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim29Q8R043 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim29Q8R043 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim29Q8R043 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim29Q8R043 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smim29Q8R043 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim29Q8R043 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim29Q8R043 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim29Q8R043 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim29Q8R043 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.17□□□□□ -0.3
Smim29Q8R043 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.17□□□□□ -0.3
Smim29Q8R043 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 1170.7 ms