Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ddx54Q8K4L0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ddx54Q8K4L0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC27.94■■■□□ 2.06
Ddx54Q8K4L0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ddx54Q8K4L0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Ddx54Q8K4L0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ddx54Q8K4L0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
Ddx54Q8K4L0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ddx54Q8K4L0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx54Q8K4L0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ddx54Q8K4L0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Ddx54Q8K4L0 Gm10657-201ENSMUST00000193528 1031 ntBASIC27.91■■■□□ 2.06
Ddx54Q8K4L0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC27.91■■■□□ 2.06
Ddx54Q8K4L0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Ddx54Q8K4L0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ddx54Q8K4L0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC27.9■■■□□ 2.06
Ddx54Q8K4L0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ddx54Q8K4L0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ddx54Q8K4L0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Ddx54Q8K4L0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Ddx54Q8K4L0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Ddx54Q8K4L0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ddx54Q8K4L0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Ddx54Q8K4L0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Ddx54Q8K4L0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ddx54Q8K4L0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC27.88■■■□□ 2.05
Ddx54Q8K4L0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ddx54Q8K4L0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC27.88■■■□□ 2.05
Ddx54Q8K4L0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Ddx54Q8K4L0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx54Q8K4L0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC27.87■■■□□ 2.05
Ddx54Q8K4L0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx54Q8K4L0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx54Q8K4L0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx54Q8K4L0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx54Q8K4L0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ddx54Q8K4L0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ddx54Q8K4L0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC27.86■■■□□ 2.05
Ddx54Q8K4L0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ddx54Q8K4L0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ddx54Q8K4L0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
Ddx54Q8K4L0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ddx54Q8K4L0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC27.85■■■□□ 2.05
Ddx54Q8K4L0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC27.85■■■□□ 2.05
Ddx54Q8K4L0 Gm43759-201ENSMUST00000196925 1261 ntBASIC27.85■■■□□ 2.05
Ddx54Q8K4L0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ddx54Q8K4L0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ddx54Q8K4L0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ddx54Q8K4L0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx54Q8K4L0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx54Q8K4L0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx54Q8K4L0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC27.84■■■□□ 2.05
Ddx54Q8K4L0 Gm7160-202ENSMUST00000188519 1027 ntBASIC27.84■■■□□ 2.05
Ddx54Q8K4L0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx54Q8K4L0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx54Q8K4L0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx54Q8K4L0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
Ddx54Q8K4L0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx54Q8K4L0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC27.83■■■□□ 2.05
Ddx54Q8K4L0 Gm6085-201ENSMUST00000182774 1470 ntBASIC27.83■■■□□ 2.05
Ddx54Q8K4L0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ddx54Q8K4L0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Ddx54Q8K4L0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ddx54Q8K4L0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
Ddx54Q8K4L0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ddx54Q8K4L0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Ddx54Q8K4L0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ddx54Q8K4L0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ddx54Q8K4L0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC27.81■■■□□ 2.04
Ddx54Q8K4L0 Gm40848-201ENSMUST00000221998 324 ntBASIC27.81■■■□□ 2.04
Ddx54Q8K4L0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
Ddx54Q8K4L0 Gm10129-202ENSMUST00000193100 1316 ntBASIC27.81■■■□□ 2.04
Ddx54Q8K4L0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
Ddx54Q8K4L0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
Ddx54Q8K4L0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ddx54Q8K4L0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ddx54Q8K4L0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Ddx54Q8K4L0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ddx54Q8K4L0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Ddx54Q8K4L0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ddx54Q8K4L0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC27.77■■■□□ 2.04
Ddx54Q8K4L0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
Ddx54Q8K4L0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Ddx54Q8K4L0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ddx54Q8K4L0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ddx54Q8K4L0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Ddx54Q8K4L0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Ddx54Q8K4L0 Gm12669-201ENSMUST00000122162 1009 ntBASIC27.76■■■□□ 2.03
Ddx54Q8K4L0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC27.76■■■□□ 2.03
Ddx54Q8K4L0 Gm18671-201ENSMUST00000214826 683 ntBASIC27.76■■■□□ 2.03
Ddx54Q8K4L0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Ddx54Q8K4L0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Ddx54Q8K4L0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC27.75■■■□□ 2.03
Ddx54Q8K4L0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Ddx54Q8K4L0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Ddx54Q8K4L0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC27.75■■■□□ 2.03
Ddx54Q8K4L0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Ddx54Q8K4L0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ddx54Q8K4L0 Spcs1-204ENSMUST00000226782 949 ntBASIC27.74■■■□□ 2.03
Ddx54Q8K4L0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms