Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
Abca8bQ8K440 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Abca8bQ8K440 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Abca8bQ8K440 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Abca8bQ8K440 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Abca8bQ8K440 Gm27405-201ENSMUST00000184201 112 ntBASIC31.86■■■□□ 2.69
Abca8bQ8K440 Gm43759-201ENSMUST00000196925 1261 ntBASIC31.86■■■□□ 2.69
Abca8bQ8K440 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Abca8bQ8K440 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Abca8bQ8K440 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC31.86■■■□□ 2.69
Abca8bQ8K440 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
Abca8bQ8K440 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
Abca8bQ8K440 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Abca8bQ8K440 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC31.85■■■□□ 2.69
Abca8bQ8K440 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Abca8bQ8K440 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Abca8bQ8K440 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC31.85■■■□□ 2.69
Abca8bQ8K440 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Abca8bQ8K440 Gm27011-201ENSMUST00000182352 972 ntBASIC31.85■■■□□ 2.69
Abca8bQ8K440 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Abca8bQ8K440 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Abca8bQ8K440 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Abca8bQ8K440 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Abca8bQ8K440 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Abca8bQ8K440 Gm10493-201ENSMUST00000097270 612 ntBASIC31.83■■■□□ 2.69
Abca8bQ8K440 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Abca8bQ8K440 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC31.83■■■□□ 2.69
Abca8bQ8K440 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Abca8bQ8K440 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Abca8bQ8K440 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
Abca8bQ8K440 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC31.82■■■□□ 2.69
Abca8bQ8K440 Gm37179-201ENSMUST00000194862 823 ntBASIC31.82■■■□□ 2.69
Abca8bQ8K440 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
Abca8bQ8K440 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
Abca8bQ8K440 Kdm3b-204ENSMUST00000224715 2032 ntBASIC31.82■■■□□ 2.68
Abca8bQ8K440 Cdc34b-202ENSMUST00000188741 1252 ntBASIC31.82■■■□□ 2.68
Abca8bQ8K440 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Abca8bQ8K440 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
Abca8bQ8K440 Spcs1-207ENSMUST00000228767 1008 ntBASIC31.82■■■□□ 2.68
Abca8bQ8K440 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC31.82■■■□□ 2.68
Abca8bQ8K440 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Abca8bQ8K440 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Abca8bQ8K440 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Abca8bQ8K440 Spcs1-204ENSMUST00000226782 949 ntBASIC31.81■■■□□ 2.68
Abca8bQ8K440 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Abca8bQ8K440 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Abca8bQ8K440 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Abca8bQ8K440 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Abca8bQ8K440 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Abca8bQ8K440 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Abca8bQ8K440 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Abca8bQ8K440 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Abca8bQ8K440 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Abca8bQ8K440 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
Abca8bQ8K440 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Abca8bQ8K440 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Abca8bQ8K440 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
Abca8bQ8K440 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Abca8bQ8K440 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC31.78■■■□□ 2.68
Abca8bQ8K440 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC31.78■■■□□ 2.68
Abca8bQ8K440 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Abca8bQ8K440 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC31.76■■■□□ 2.67
Abca8bQ8K440 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Abca8bQ8K440 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC31.75■■■□□ 2.67
Abca8bQ8K440 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Abca8bQ8K440 Gm26833-201ENSMUST00000180899 440 ntBASIC31.75■■■□□ 2.67
Abca8bQ8K440 Gm7143-201ENSMUST00000222811 859 ntBASIC31.75■■■□□ 2.67
Abca8bQ8K440 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
Abca8bQ8K440 Gm6085-201ENSMUST00000182774 1470 ntBASIC31.73■■■□□ 2.67
Abca8bQ8K440 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Abca8bQ8K440 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC31.73■■■□□ 2.67
Abca8bQ8K440 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Abca8bQ8K440 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Abca8bQ8K440 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC31.73■■■□□ 2.67
Abca8bQ8K440 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Abca8bQ8K440 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Abca8bQ8K440 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Abca8bQ8K440 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Abca8bQ8K440 Gm10129-202ENSMUST00000193100 1316 ntBASIC31.72■■■□□ 2.67
Abca8bQ8K440 AC099934.2-201ENSMUST00000196389 70 ntBASIC31.71■■■□□ 2.67
Abca8bQ8K440 AC156953.1-201ENSMUST00000196953 70 ntBASIC31.71■■■□□ 2.67
Abca8bQ8K440 AC157822.2-201ENSMUST00000200291 70 ntBASIC31.71■■■□□ 2.67
Abca8bQ8K440 Gm42569-201ENSMUST00000200539 472 ntBASIC31.71■■■□□ 2.67
Abca8bQ8K440 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC31.71■■■□□ 2.67
Abca8bQ8K440 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Abca8bQ8K440 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Abca8bQ8K440 Gm4430-201ENSMUST00000192413 1943 ntBASIC31.71■■■□□ 2.67
Abca8bQ8K440 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Abca8bQ8K440 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Abca8bQ8K440 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Abca8bQ8K440 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
Abca8bQ8K440 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Abca8bQ8K440 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Abca8bQ8K440 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Abca8bQ8K440 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Abca8bQ8K440 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Abca8bQ8K440 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC31.69■■■□□ 2.66
Abca8bQ8K440 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Abca8bQ8K440 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Abca8bQ8K440 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms