Protein–RNA interactions for Protein: Q8K387

Usp45, Ubiquitin carboxyl-terminal hydrolase 45, mousemouse

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp45Q8K387 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp45Q8K387 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Usp45Q8K387 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp45Q8K387 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp45Q8K387 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp45Q8K387 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp45Q8K387 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.63■□□□□ 0.89
Usp45Q8K387 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Usp45Q8K387 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp45Q8K387 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp45Q8K387 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp45Q8K387 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp45Q8K387 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp45Q8K387 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Usp45Q8K387 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp45Q8K387 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp45Q8K387 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp45Q8K387 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp45Q8K387 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp45Q8K387 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp45Q8K387 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp45Q8K387 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.61■□□□□ 0.89
Usp45Q8K387 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Usp45Q8K387 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp45Q8K387 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp45Q8K387 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp45Q8K387 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Usp45Q8K387 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp45Q8K387 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Usp45Q8K387 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp45Q8K387 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp45Q8K387 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Usp45Q8K387 Cap2-205ENSMUST00000225824 1634 ntBASIC20.6■□□□□ 0.89
Usp45Q8K387 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp45Q8K387 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp45Q8K387 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp45Q8K387 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp45Q8K387 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Usp45Q8K387 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Usp45Q8K387 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Usp45Q8K387 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp45Q8K387 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp45Q8K387 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.59■□□□□ 0.89
Usp45Q8K387 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp45Q8K387 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Usp45Q8K387 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp45Q8K387 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp45Q8K387 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.59■□□□□ 0.89
Usp45Q8K387 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp45Q8K387 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp45Q8K387 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp45Q8K387 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.58■□□□□ 0.89
Usp45Q8K387 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp45Q8K387 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.58■□□□□ 0.89
Usp45Q8K387 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.58■□□□□ 0.88
Usp45Q8K387 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp45Q8K387 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp45Q8K387 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp45Q8K387 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp45Q8K387 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.57■□□□□ 0.88
Usp45Q8K387 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Usp45Q8K387 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp45Q8K387 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.57■□□□□ 0.88
Usp45Q8K387 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp45Q8K387 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp45Q8K387 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp45Q8K387 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp45Q8K387 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp45Q8K387 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Usp45Q8K387 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp45Q8K387 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Usp45Q8K387 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.56■□□□□ 0.88
Usp45Q8K387 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp45Q8K387 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp45Q8K387 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp45Q8K387 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp45Q8K387 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp45Q8K387 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.55■□□□□ 0.88
Usp45Q8K387 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp45Q8K387 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp45Q8K387 Gm45444-201ENSMUST00000211394 898 ntBASIC20.55■□□□□ 0.88
Usp45Q8K387 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.55■□□□□ 0.88
Usp45Q8K387 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp45Q8K387 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp45Q8K387 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp45Q8K387 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp45Q8K387 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Usp45Q8K387 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Usp45Q8K387 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp45Q8K387 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms