Protein–RNA interactions for Protein: Q8K2V1

Ppp4r1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r1Q8K2V1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp4r1Q8K2V1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.34■■□□□ 1.01
Ppp4r1Q8K2V1 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.34■■□□□ 1.01
Ppp4r1Q8K2V1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r1Q8K2V1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r1Q8K2V1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r1Q8K2V1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.34■■□□□ 1.01
Ppp4r1Q8K2V1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r1Q8K2V1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r1Q8K2V1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ppp4r1Q8K2V1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ppp4r1Q8K2V1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.33■■□□□ 1.01
Ppp4r1Q8K2V1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Ppp4r1Q8K2V1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ppp4r1Q8K2V1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ppp4r1Q8K2V1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ppp4r1Q8K2V1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ppp4r1Q8K2V1 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.31■■□□□ 1
Ppp4r1Q8K2V1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp4r1Q8K2V1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp4r1Q8K2V1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.31■■□□□ 1
Ppp4r1Q8K2V1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r1Q8K2V1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r1Q8K2V1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r1Q8K2V1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r1Q8K2V1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r1Q8K2V1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.28■■□□□ 1
Ppp4r1Q8K2V1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r1Q8K2V1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r1Q8K2V1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r1Q8K2V1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r1Q8K2V1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ppp4r1Q8K2V1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ppp4r1Q8K2V1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ppp4r1Q8K2V1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.27■■□□□ 1
Ppp4r1Q8K2V1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ppp4r1Q8K2V1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ppp4r1Q8K2V1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp4r1Q8K2V1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ppp4r1Q8K2V1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp4r1Q8K2V1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp4r1Q8K2V1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp4r1Q8K2V1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.26■□□□□ 0.99
Ppp4r1Q8K2V1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.26■□□□□ 0.99
Ppp4r1Q8K2V1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp4r1Q8K2V1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ppp4r1Q8K2V1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ppp4r1Q8K2V1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ppp4r1Q8K2V1 Gm45444-201ENSMUST00000211394 898 ntBASIC21.25■□□□□ 0.99
Ppp4r1Q8K2V1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.25■□□□□ 0.99
Ppp4r1Q8K2V1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ppp4r1Q8K2V1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ppp4r1Q8K2V1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ppp4r1Q8K2V1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ppp4r1Q8K2V1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ppp4r1Q8K2V1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ppp4r1Q8K2V1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ppp4r1Q8K2V1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ppp4r1Q8K2V1 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.23■□□□□ 0.99
Ppp4r1Q8K2V1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ppp4r1Q8K2V1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ppp4r1Q8K2V1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ppp4r1Q8K2V1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ppp4r1Q8K2V1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.23■□□□□ 0.99
Ppp4r1Q8K2V1 Gm5921-201ENSMUST00000075898 882 ntBASIC21.23■□□□□ 0.99
Ppp4r1Q8K2V1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ppp4r1Q8K2V1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ppp4r1Q8K2V1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ppp4r1Q8K2V1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ppp4r1Q8K2V1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ppp4r1Q8K2V1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.22■□□□□ 0.99
Ppp4r1Q8K2V1 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.22■□□□□ 0.99
Ppp4r1Q8K2V1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ppp4r1Q8K2V1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ppp4r1Q8K2V1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ppp4r1Q8K2V1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ppp4r1Q8K2V1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ppp4r1Q8K2V1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms