Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.08■■□□□ 1.29
Sox30Q8CGW4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Sox30Q8CGW4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sox30Q8CGW4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sox30Q8CGW4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Sox30Q8CGW4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Sox30Q8CGW4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.08■■□□□ 1.28
Sox30Q8CGW4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sox30Q8CGW4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sox30Q8CGW4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sox30Q8CGW4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sox30Q8CGW4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sox30Q8CGW4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Sox30Q8CGW4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Sox30Q8CGW4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sox30Q8CGW4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sox30Q8CGW4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sox30Q8CGW4 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.06■■□□□ 1.28
Sox30Q8CGW4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sox30Q8CGW4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sox30Q8CGW4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sox30Q8CGW4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sox30Q8CGW4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sox30Q8CGW4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sox30Q8CGW4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sox30Q8CGW4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.04■■□□□ 1.28
Sox30Q8CGW4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.04■■□□□ 1.28
Sox30Q8CGW4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.03■■□□□ 1.28
Sox30Q8CGW4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sox30Q8CGW4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sox30Q8CGW4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Sox30Q8CGW4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sox30Q8CGW4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sox30Q8CGW4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Sox30Q8CGW4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sox30Q8CGW4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sox30Q8CGW4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sox30Q8CGW4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sox30Q8CGW4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sox30Q8CGW4 Gm14523-201ENSMUST00000117260 558 ntBASIC23■■□□□ 1.27
Sox30Q8CGW4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sox30Q8CGW4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23■■□□□ 1.27
Sox30Q8CGW4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Sox30Q8CGW4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Sox30Q8CGW4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sox30Q8CGW4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sox30Q8CGW4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Sox30Q8CGW4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Sox30Q8CGW4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Sox30Q8CGW4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sox30Q8CGW4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sox30Q8CGW4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.98■■□□□ 1.27
Sox30Q8CGW4 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.98■■□□□ 1.27
Sox30Q8CGW4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sox30Q8CGW4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sox30Q8CGW4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Sox30Q8CGW4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Sox30Q8CGW4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sox30Q8CGW4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sox30Q8CGW4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox30Q8CGW4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sox30Q8CGW4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sox30Q8CGW4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sox30Q8CGW4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.96■■□□□ 1.27
Sox30Q8CGW4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sox30Q8CGW4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sox30Q8CGW4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sox30Q8CGW4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.95■■□□□ 1.27
Sox30Q8CGW4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Sox30Q8CGW4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Sox30Q8CGW4 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.95■■□□□ 1.26
Sox30Q8CGW4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.95■■□□□ 1.26
Sox30Q8CGW4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sox30Q8CGW4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.94■■□□□ 1.26
Sox30Q8CGW4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sox30Q8CGW4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms