Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp28Q8CGV8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp28Q8CGV8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp28Q8CGV8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp28Q8CGV8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mmp28Q8CGV8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp28Q8CGV8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp28Q8CGV8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp28Q8CGV8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp28Q8CGV8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp28Q8CGV8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp28Q8CGV8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp28Q8CGV8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Mmp28Q8CGV8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp28Q8CGV8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp28Q8CGV8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp28Q8CGV8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp28Q8CGV8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.66■□□□□ 0.42
Mmp28Q8CGV8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp28Q8CGV8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Mmp28Q8CGV8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp28Q8CGV8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Mmp28Q8CGV8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp28Q8CGV8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp28Q8CGV8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp28Q8CGV8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.64■□□□□ 0.42
Mmp28Q8CGV8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp28Q8CGV8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp28Q8CGV8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp28Q8CGV8 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.64■□□□□ 0.41
Mmp28Q8CGV8 Gm9812-201ENSMUST00000061934 968 ntBASIC17.64■□□□□ 0.41
Mmp28Q8CGV8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp28Q8CGV8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp28Q8CGV8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.64■□□□□ 0.41
Mmp28Q8CGV8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp28Q8CGV8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.63■□□□□ 0.41
Mmp28Q8CGV8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp28Q8CGV8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Mmp28Q8CGV8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp28Q8CGV8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Mmp28Q8CGV8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.6■□□□□ 0.41
Mmp28Q8CGV8 Gm45364-201ENSMUST00000210883 159 ntBASIC17.6■□□□□ 0.41
Mmp28Q8CGV8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Mmp28Q8CGV8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp28Q8CGV8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp28Q8CGV8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.6■□□□□ 0.41
Mmp28Q8CGV8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms