Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smc4Q8CG47 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.87■■□□□ 1.73
Smc4Q8CG47 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smc4Q8CG47 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smc4Q8CG47 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smc4Q8CG47 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smc4Q8CG47 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smc4Q8CG47 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smc4Q8CG47 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC25.86■■□□□ 1.73
Smc4Q8CG47 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.86■■□□□ 1.73
Smc4Q8CG47 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smc4Q8CG47 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Smc4Q8CG47 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smc4Q8CG47 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Smc4Q8CG47 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Smc4Q8CG47 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Smc4Q8CG47 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Smc4Q8CG47 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC25.84■■□□□ 1.73
Smc4Q8CG47 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Smc4Q8CG47 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Smc4Q8CG47 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Smc4Q8CG47 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.83■■□□□ 1.73
Smc4Q8CG47 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.83■■□□□ 1.73
Smc4Q8CG47 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Smc4Q8CG47 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Smc4Q8CG47 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC25.83■■□□□ 1.72
Smc4Q8CG47 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Smc4Q8CG47 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Smc4Q8CG47 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Smc4Q8CG47 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
Smc4Q8CG47 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.82■■□□□ 1.72
Smc4Q8CG47 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Smc4Q8CG47 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Smc4Q8CG47 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Smc4Q8CG47 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Smc4Q8CG47 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Smc4Q8CG47 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Smc4Q8CG47 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Smc4Q8CG47 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Smc4Q8CG47 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Smc4Q8CG47 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Smc4Q8CG47 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Smc4Q8CG47 Gm15039-201ENSMUST00000118914 875 ntBASIC25.79■■□□□ 1.72
Smc4Q8CG47 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC25.79■■□□□ 1.72
Smc4Q8CG47 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC25.79■■□□□ 1.72
Smc4Q8CG47 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Smc4Q8CG47 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Smc4Q8CG47 AC153962.1-201ENSMUST00000218530 1948 ntBASIC25.78■■□□□ 1.72
Smc4Q8CG47 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Smc4Q8CG47 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Smc4Q8CG47 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Smc4Q8CG47 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Smc4Q8CG47 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Smc4Q8CG47 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Smc4Q8CG47 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC25.78■■□□□ 1.72
Smc4Q8CG47 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Smc4Q8CG47 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Smc4Q8CG47 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
Smc4Q8CG47 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Smc4Q8CG47 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Smc4Q8CG47 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Smc4Q8CG47 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Smc4Q8CG47 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Smc4Q8CG47 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.77■■□□□ 1.72
Smc4Q8CG47 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Smc4Q8CG47 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC25.76■■□□□ 1.71
Smc4Q8CG47 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Smc4Q8CG47 Gm9870-201ENSMUST00000063874 645 ntBASIC25.76■■□□□ 1.71
Smc4Q8CG47 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Smc4Q8CG47 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Smc4Q8CG47 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Smc4Q8CG47 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Smc4Q8CG47 Gm4430-201ENSMUST00000192413 1943 ntBASIC25.76■■□□□ 1.71
Smc4Q8CG47 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Smc4Q8CG47 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Smc4Q8CG47 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC25.75■■□□□ 1.71
Smc4Q8CG47 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
Smc4Q8CG47 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC25.75■■□□□ 1.71
Smc4Q8CG47 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Smc4Q8CG47 Golgb1-201ENSMUST00000023534 498 ntBASIC25.75■■□□□ 1.71
Smc4Q8CG47 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Smc4Q8CG47 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Smc4Q8CG47 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC25.74■■□□□ 1.71
Smc4Q8CG47 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Smc4Q8CG47 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Smc4Q8CG47 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Smc4Q8CG47 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Smc4Q8CG47 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.74■■□□□ 1.71
Smc4Q8CG47 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Smc4Q8CG47 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Smc4Q8CG47 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
Smc4Q8CG47 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Smc4Q8CG47 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
Smc4Q8CG47 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
Smc4Q8CG47 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Smc4Q8CG47 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
Smc4Q8CG47 Gm42418-201ENSMUST00000182010 1831 ntBASIC25.72■■□□□ 1.71
Smc4Q8CG47 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Smc4Q8CG47 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Smc4Q8CG47 Kdm3b-204ENSMUST00000224715 2032 ntBASIC25.72■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms