Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Lysmd4Q8CC84 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd4Q8CC84 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd4Q8CC84 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd4Q8CC84 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd4Q8CC84 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Lysmd4Q8CC84 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd4Q8CC84 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd4Q8CC84 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lysmd4Q8CC84 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lysmd4Q8CC84 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lysmd4Q8CC84 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lysmd4Q8CC84 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd4Q8CC84 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd4Q8CC84 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd4Q8CC84 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd4Q8CC84 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd4Q8CC84 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd4Q8CC84 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd4Q8CC84 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd4Q8CC84 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd4Q8CC84 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd4Q8CC84 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd4Q8CC84 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd4Q8CC84 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd4Q8CC84 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd4Q8CC84 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd4Q8CC84 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd4Q8CC84 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
Lysmd4Q8CC84 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Lysmd4Q8CC84 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd4Q8CC84 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Lysmd4Q8CC84 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Lysmd4Q8CC84 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd4Q8CC84 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd4Q8CC84 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd4Q8CC84 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd4Q8CC84 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd4Q8CC84 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd4Q8CC84 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd4Q8CC84 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd4Q8CC84 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Lysmd4Q8CC84 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd4Q8CC84 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd4Q8CC84 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.69■□□□□ 0.58
Lysmd4Q8CC84 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.69■□□□□ 0.58
Lysmd4Q8CC84 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Lysmd4Q8CC84 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Lysmd4Q8CC84 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd4Q8CC84 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd4Q8CC84 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd4Q8CC84 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Lysmd4Q8CC84 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd4Q8CC84 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd4Q8CC84 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Lysmd4Q8CC84 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms