Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim35Q8C006 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim35Q8C006 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim35Q8C006 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim35Q8C006 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim35Q8C006 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim35Q8C006 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.05■□□□□ 0.96
Trim35Q8C006 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim35Q8C006 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim35Q8C006 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Trim35Q8C006 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim35Q8C006 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim35Q8C006 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.04■□□□□ 0.96
Trim35Q8C006 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim35Q8C006 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim35Q8C006 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim35Q8C006 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim35Q8C006 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim35Q8C006 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim35Q8C006 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim35Q8C006 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim35Q8C006 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim35Q8C006 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.03■□□□□ 0.96
Trim35Q8C006 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim35Q8C006 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim35Q8C006 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim35Q8C006 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim35Q8C006 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.02■□□□□ 0.96
Trim35Q8C006 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim35Q8C006 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim35Q8C006 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim35Q8C006 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Trim35Q8C006 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim35Q8C006 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Trim35Q8C006 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.01■□□□□ 0.95
Trim35Q8C006 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim35Q8C006 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.01■□□□□ 0.95
Trim35Q8C006 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim35Q8C006 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim35Q8C006 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim35Q8C006 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim35Q8C006 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trim35Q8C006 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim35Q8C006 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim35Q8C006 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim35Q8C006 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim35Q8C006 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim35Q8C006 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim35Q8C006 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim35Q8C006 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim35Q8C006 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim35Q8C006 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim35Q8C006 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim35Q8C006 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim35Q8C006 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim35Q8C006 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Trim35Q8C006 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Trim35Q8C006 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim35Q8C006 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim35Q8C006 Gm14913-201ENSMUST00000120011 1093 ntBASIC20.98■□□□□ 0.95
Trim35Q8C006 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim35Q8C006 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim35Q8C006 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim35Q8C006 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim35Q8C006 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim35Q8C006 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim35Q8C006 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim35Q8C006 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim35Q8C006 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim35Q8C006 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim35Q8C006 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim35Q8C006 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim35Q8C006 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim35Q8C006 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim35Q8C006 Notumos-201ENSMUST00000151998 2659 ntBASIC20.96■□□□□ 0.95
Trim35Q8C006 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim35Q8C006 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim35Q8C006 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim35Q8C006 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim35Q8C006 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim35Q8C006 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Trim35Q8C006 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.96■□□□□ 0.95
Trim35Q8C006 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim35Q8C006 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim35Q8C006 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim35Q8C006 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim35Q8C006 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim35Q8C006 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim35Q8C006 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms