Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tdp1Q8BJ37 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tdp1Q8BJ37 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.3■■□□□ 1.32
Tdp1Q8BJ37 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.3■■□□□ 1.32
Tdp1Q8BJ37 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Tdp1Q8BJ37 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tdp1Q8BJ37 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.3■■□□□ 1.32
Tdp1Q8BJ37 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tdp1Q8BJ37 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tdp1Q8BJ37 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tdp1Q8BJ37 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tdp1Q8BJ37 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tdp1Q8BJ37 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tdp1Q8BJ37 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tdp1Q8BJ37 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tdp1Q8BJ37 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tdp1Q8BJ37 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tdp1Q8BJ37 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Tdp1Q8BJ37 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tdp1Q8BJ37 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Tdp1Q8BJ37 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Tdp1Q8BJ37 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Tdp1Q8BJ37 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tdp1Q8BJ37 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Tdp1Q8BJ37 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.27■■□□□ 1.32
Tdp1Q8BJ37 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
Tdp1Q8BJ37 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Tdp1Q8BJ37 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tdp1Q8BJ37 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.27■■□□□ 1.32
Tdp1Q8BJ37 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Tdp1Q8BJ37 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.27■■□□□ 1.32
Tdp1Q8BJ37 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tdp1Q8BJ37 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tdp1Q8BJ37 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Tdp1Q8BJ37 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tdp1Q8BJ37 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tdp1Q8BJ37 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Tdp1Q8BJ37 Gm43137-201ENSMUST00000198052 594 ntBASIC23.26■■□□□ 1.31
Tdp1Q8BJ37 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.26■■□□□ 1.31
Tdp1Q8BJ37 Gm6139-201ENSMUST00000079261 882 ntBASIC23.26■■□□□ 1.31
Tdp1Q8BJ37 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tdp1Q8BJ37 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tdp1Q8BJ37 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tdp1Q8BJ37 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tdp1Q8BJ37 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tdp1Q8BJ37 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tdp1Q8BJ37 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Tdp1Q8BJ37 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tdp1Q8BJ37 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tdp1Q8BJ37 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tdp1Q8BJ37 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Tdp1Q8BJ37 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
Tdp1Q8BJ37 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.24■■□□□ 1.31
Tdp1Q8BJ37 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Tdp1Q8BJ37 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Tdp1Q8BJ37 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp1Q8BJ37 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Tdp1Q8BJ37 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp1Q8BJ37 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp1Q8BJ37 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp1Q8BJ37 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp1Q8BJ37 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp1Q8BJ37 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tdp1Q8BJ37 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.22■■□□□ 1.31
Tdp1Q8BJ37 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Tdp1Q8BJ37 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Tdp1Q8BJ37 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Tdp1Q8BJ37 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Tdp1Q8BJ37 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tdp1Q8BJ37 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Tdp1Q8BJ37 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.21■■□□□ 1.31
Tdp1Q8BJ37 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.21■■□□□ 1.31
Tdp1Q8BJ37 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.21■■□□□ 1.31
Tdp1Q8BJ37 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tdp1Q8BJ37 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Tdp1Q8BJ37 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tdp1Q8BJ37 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tdp1Q8BJ37 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tdp1Q8BJ37 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tdp1Q8BJ37 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Tdp1Q8BJ37 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Tdp1Q8BJ37 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tdp1Q8BJ37 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tdp1Q8BJ37 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tdp1Q8BJ37 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tdp1Q8BJ37 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.18■■□□□ 1.3
Tdp1Q8BJ37 Mir7075-201ENSMUST00000184187 82 ntBASIC23.18■■□□□ 1.3
Tdp1Q8BJ37 Gm7143-201ENSMUST00000222811 859 ntBASIC23.18■■□□□ 1.3
Tdp1Q8BJ37 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tdp1Q8BJ37 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tdp1Q8BJ37 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Tdp1Q8BJ37 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tdp1Q8BJ37 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Tdp1Q8BJ37 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Tdp1Q8BJ37 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.17■■□□□ 1.3
Tdp1Q8BJ37 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Tdp1Q8BJ37 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Tdp1Q8BJ37 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tdp1Q8BJ37 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Tdp1Q8BJ37 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms